BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038664
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...   162   3e-38
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]   162   3e-38
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       161   4e-38
emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]   159   2e-37
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]   159   2e-37

>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/138 (54%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
 Frame = -1

Query: 413  VKITRDRPKRLLSLSQETYIKKVLERFNMTDCKQMDLPVSLAESLSSEMSPKNPTETQAM 234
            +KI RDR + +L LSQETYI K+LERF M DC     P+   +  +    PKN  E + M
Sbjct: 1035 IKIHRDRSRGILGLSQETYINKILERFRMKDCSPSVAPIVKGDRFNLNQCPKNDFEREQM 1094

Query: 233  KNVPYSSAVGSLMYAMLCTRPDICYAVGLVSRFQTNPGVAHWKAVKKIMRYLKGTVDYSL 54
            KN+PY+S VGSLMYA +CTRPDI +AVG++ R+Q+NPG+ HW+A KK++RYL+GT DY L
Sbjct: 1095 KNIPYASVVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWRAAKKVLRYLQGTKDYML 1154

Query: 53   VYQGKD-LKLIGYSDVDW 3
            +Y+  D L  IGYSD D+
Sbjct: 1155 MYRQTDNLDAIGYSDSDF 1172


>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
          Length = 668

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/137 (56%), Positives = 103/137 (75%)
 Frame = -1

Query: 413 VKITRDRPKRLLSLSQETYIKKVLERFNMTDCKQMDLPVSLAESLSSEMSPKNPTETQAM 234
           +++TRDR  RLL+LSQ  YI KVL +F M + K+ +LP      LS E  PK P + + M
Sbjct: 380 IQMTRDRKNRLLALSQAAYIDKVLVKFAMENSKKGNLPSRHGVHLSKEQCPKTPQDEEKM 439

Query: 233 KNVPYSSAVGSLMYAMLCTRPDICYAVGLVSRFQTNPGVAHWKAVKKIMRYLKGTVDYSL 54
           + VPY+SAVGSLMYAMLCTRPDIC+AVG+VSR+Q+NPG+ HW AVK I++YL+ T +Y L
Sbjct: 440 RRVPYASAVGSLMYAMLCTRPDICFAVGVVSRYQSNPGLDHWVAVKHILKYLRRTRNYML 499

Query: 53  VYQGKDLKLIGYSDVDW 3
           VY G++L  IGY+D D+
Sbjct: 500 VYSGRELIPIGYTDSDF 516


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  161 bits (408), Expect = 4e-38
 Identities = 77/137 (56%), Positives = 100/137 (72%)
 Frame = -1

Query: 413  VKITRDRPKRLLSLSQETYIKKVLERFNMTDCKQMDLPVSLAESLSSEMSPKNPTETQAM 234
            ++I R+R  + L++SQ +YI KVL R+ M + K+  LP      LS E  PK P E + M
Sbjct: 1040 IQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDM 1099

Query: 233  KNVPYSSAVGSLMYAMLCTRPDICYAVGLVSRFQTNPGVAHWKAVKKIMRYLKGTVDYSL 54
            +N+PYSSAVGSLMYAMLCTRPDICY+VG+VSR+Q+NPG  HW AVK I++YL+ T +Y L
Sbjct: 1100 RNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYML 1159

Query: 53   VYQGKDLKLIGYSDVDW 3
            VY  KDL L GY+D D+
Sbjct: 1160 VYGAKDLILTGYTDSDF 1176


>emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]
          Length = 745

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/138 (55%), Positives = 102/138 (73%), Gaps = 1/138 (0%)
 Frame = -1

Query: 413 VKITRDRPKRLLSLSQETYIKKVLERFNMTDCKQMDLPVSLAESLSSEMSPKNPTETQAM 234
           +KI RDR + +L LSQETYI KVLERF M +C     P+  +   + +  PKN  E + M
Sbjct: 420 IKIHRDRFQGILGLSQETYINKVLERFWMKNCSLSVSPIVKSNRFNLDQCPKNDLEREQM 479

Query: 233 KNVPYSSAVGSLMYAMLCTRPDICYAVGLVSRFQTNPGVAHWKAVKKIMRYLKGTVDYSL 54
           KN+PY+SAVGSLMYA +CTRPDI +AVG++ R+Q+NPG  HWKA KK+MRYL+GT DY L
Sbjct: 480 KNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGKDHWKAAKKVMRYLQGTKDYKL 539

Query: 53  VY-QGKDLKLIGYSDVDW 3
           +Y +  +L+++GYSD D+
Sbjct: 540 MYRRTSNLEVVGYSDSDF 557


>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
          Length = 633

 Score =  159 bits (403), Expect = 2e-37
 Identities = 78/137 (56%), Positives = 100/137 (72%)
 Frame = -1

Query: 413 VKITRDRPKRLLSLSQETYIKKVLERFNMTDCKQMDLPVSLAESLSSEMSPKNPTETQAM 234
           +K+ R+R K+++ LSQ  YI  +L RFNM   K+  LP      LS + SPK P E ++M
Sbjct: 345 IKLMRNRKKKMIGLSQALYIDTILNRFNMQGSKKGFLPFRHGIXLSKDQSPKTPEEIESM 404

Query: 233 KNVPYSSAVGSLMYAMLCTRPDICYAVGLVSRFQTNPGVAHWKAVKKIMRYLKGTVDYSL 54
           K VPY+SAVGSLMYAMLCTRPDIC+AVG+VSRFQ+N G  HW AVK I++YLK T DY L
Sbjct: 405 KAVPYASAVGSLMYAMLCTRPDICFAVGMVSRFQSNXGREHWXAVKHIIKYLKRTRDYML 464

Query: 53  VYQGKDLKLIGYSDVDW 3
           V+Q ++L  IGY+D D+
Sbjct: 465 VFQSENLXPIGYTDSDF 481