BLASTX nr result

ID: Coptis21_contig00038652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038652
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27895.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_003544365.1| PREDICTED: uncharacterized protein LOC100816...    57   2e-06
ref|XP_002522601.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>emb|CBI27895.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 24/40 (60%), Positives = 33/40 (82%)
 Frame = +1

Query: 301 AEQDKKSGVKRLKLQPISKPTEVKYCKYYLQGNCHQGDSC 420
           AE++K+ GVKRL+L P+SKP  V YC++YL+G CH+GD C
Sbjct: 209 AEKNKELGVKRLRLLPVSKPKTVTYCRHYLKGRCHEGDHC 248


>ref|XP_003544365.1| PREDICTED: uncharacterized protein LOC100816509 [Glycine max]
          Length = 445

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 22/40 (55%), Positives = 31/40 (77%)
 Frame = +1

Query: 301 AEQDKKSGVKRLKLQPISKPTEVKYCKYYLQGNCHQGDSC 420
           AE++K+ GVKRL+LQ + KP  V +C++YL G CH+GD C
Sbjct: 313 AEKNKQLGVKRLQLQHVQKPKVVSHCRHYLNGRCHEGDKC 352


>ref|XP_002522601.1| conserved hypothetical protein [Ricinus communis]
           gi|223538077|gb|EEF39688.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 932

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
 Frame = +1

Query: 31  DTIEVDEPNV----EKGQVSIDCTTKQGEKE-----IDEKVVLSNIPIAESKERRSWLDY 183
           D+I   EPN     +KG  + +     G+KE     I   ++ SN     SK+       
Sbjct: 368 DSILAQEPNEYKKQKKGHETKERNKGSGDKEKKKGNIGCPMICSNNSALSSKKLDQGATG 427

Query: 184 SDIYRICDAGPSKRNEVKKAGVMTEXXXXXXXXXXXXXXAEQDKKSGVKRLKLQPISKPT 363
           S      +   S     KK G  +E              A+++++ GVKRLKL+P+ KP 
Sbjct: 428 SQGITCKEKQDSGLCNKKKRGPPSEEKKEKKKEKKRKKRAQKNRELGVKRLKLRPVEKPK 487

Query: 364 EVKYCKYYLQGNCHQGDSC 420
            V +C++Y++G C +G+ C
Sbjct: 488 PVVFCRHYIRGRCQEGEKC 506


Top