BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038649
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containi...    84   9e-15
ref|XP_003589699.1| Pentatricopeptide repeat-containing protein ...    82   3e-14
ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
emb|CBI22850.3| unnamed protein product [Vitis vinifera]               78   9e-13

>ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 37/78 (47%), Positives = 53/78 (67%)
 Frame = +2

Query: 2   NRLMTGYRCHADLITHTSLISGLCERFTLNEAMIYLFKMLKEGTFPSVATWNVLVRSLFS 181
           +R+  G     D+I HTSL+ G+C    + EA++YL KML +G FP++ATW+VLVR  F 
Sbjct: 587 DRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFK 646

Query: 182 KMGSLGPTQLLQDILENG 235
           K+G +GP ++L DIL  G
Sbjct: 647 KLGHMGPIRILDDILGKG 664


>ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478747|gb|AES59950.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 806

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 35/65 (53%), Positives = 49/65 (75%)
 Frame = +2

Query: 32  ADLITHTSLISGLCERFTLNEAMIYLFKMLKEGTFPSVATWNVLVRSLFSKMGSLGPTQL 211
           AD+ITHT ++ G+C      EA++YL +MLK G FP++ATWNVLVR  FSK+G +GP ++
Sbjct: 593 ADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIRI 652

Query: 212 LQDIL 226
           L DI+
Sbjct: 653 LDDII 657


>ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 35/74 (47%), Positives = 53/74 (71%)
 Frame = +2

Query: 11  MTGYRCHADLITHTSLISGLCERFTLNEAMIYLFKMLKEGTFPSVATWNVLVRSLFSKMG 190
           M    C  +++ +TSL+SGLC +  L++AM+YL KML EG  P+ ATWNVLVR +F+ +G
Sbjct: 568 MDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLG 627

Query: 191 SLGPTQLLQDILEN 232
           ++GP  L+  I+E+
Sbjct: 628 TIGPMHLIDHIIED 641


>ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/78 (52%), Positives = 53/78 (67%)
 Frame = +2

Query: 2   NRLMTGYRCHADLITHTSLISGLCERFTLNEAMIYLFKMLKEGTFPSVATWNVLVRSLFS 181
           +RL  G + H D+I +TSLISG+C    + EA++YL +ML EG  P+VATWNVLVR LFS
Sbjct: 585 DRLSAG-KWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFS 643

Query: 182 KMGSLGPTQLLQDILENG 235
            MG  G  Q L  +L +G
Sbjct: 644 NMGHSGAVQFLDAVLGSG 661


>emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/71 (54%), Positives = 49/71 (69%)
 Frame = +2

Query: 2   NRLMTGYRCHADLITHTSLISGLCERFTLNEAMIYLFKMLKEGTFPSVATWNVLVRSLFS 181
           +RL  G + H D+I +TSLISG+C    + EA++YL +ML EG  P+VATWNVLVR LFS
Sbjct: 585 DRLSAG-KWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFS 643

Query: 182 KMGSLGPTQLL 214
            MG  G  Q L
Sbjct: 644 NMGHSGAVQFL 654