BLASTX nr result

ID: Coptis21_contig00038643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038643
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245...    94   9e-18
emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]    94   9e-18
ref|XP_002519325.1| DNA binding protein, putative [Ricinus commu...    91   1e-16
ref|XP_004147629.1| PREDICTED: uncharacterized protein LOC101204...    86   4e-15
gb|ADN34038.1| DNA binding protein [Cucumis melo subsp. melo]          84   9e-15

>ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245891 [Vitis vinifera]
          Length = 314

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/76 (56%), Positives = 55/76 (72%)
 Frame = -2

Query: 245 TTDCDGCSTEEEKWMILHNIRHKGIFRRLCTSCVLKSHPGYFCPICFQLYSNPHSSIPNN 66
           T +C GCS  + +W+ LH++RH+GI+RRLCTSCVLK HPG FCPICF+ Y  P S  P+ 
Sbjct: 7   TPECGGCSLTD-RWL-LHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDPPPS--PHL 62

Query: 65  CVKCLKCPSIVHLNCL 18
              C KCPSI H +C+
Sbjct: 63  RSLCQKCPSISHQHCV 78


>emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]
          Length = 1076

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/76 (56%), Positives = 55/76 (72%)
 Frame = -2

Query: 245 TTDCDGCSTEEEKWMILHNIRHKGIFRRLCTSCVLKSHPGYFCPICFQLYSNPHSSIPNN 66
           T +C GCS  + +W+ LH++RH+GI+RRLCTSCVLK HPG FCPICF+ Y  P S  P+ 
Sbjct: 769 TPECGGCSLTD-RWL-LHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDPPPS--PHL 824

Query: 65  CVKCLKCPSIVHLNCL 18
              C KCPSI H +C+
Sbjct: 825 RSLCQKCPSISHQHCV 840


>ref|XP_002519325.1| DNA binding protein, putative [Ricinus communis]
           gi|223541640|gb|EEF43189.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 186

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
 Frame = -2

Query: 251 QLTTDCDGCSTEEEKWMILHNIRHKGIFRRLCTSCVLKSHPGYFCPICFQLYSNPHSSI- 75
           Q    C GC  E  +W+ LHN+RH+  +RRLCT+C+LK+H G FCP CF +Y   H S+ 
Sbjct: 2   QQRLQCGGCGGEN-RWL-LHNVRHRAAYRRLCTNCILKTHQGLFCPFCFHVYD--HDSLL 57

Query: 74  ---PNNCVKCLKCPSIVHLNCL 18
              P   V CLKCPSI HL+CL
Sbjct: 58  VPAPEERVMCLKCPSISHLSCL 79


>ref|XP_004147629.1| PREDICTED: uncharacterized protein LOC101204799 [Cucumis sativus]
           gi|449498761|ref|XP_004160626.1| PREDICTED:
           uncharacterized protein LOC101231018 [Cucumis sativus]
          Length = 278

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
 Frame = -2

Query: 275 RQKMNH-HYQLTTDCDGCSTEEEKWMILHNIRHKGIFRRLCTSCVLKSHPGYFCPICFQL 99
           RQ  NH      + C  C   +    ILHN+RHK  FRRLCT+CVLK +   FCP+CF +
Sbjct: 3   RQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDV 62

Query: 98  YSNPHSSIPNNCVKCLKCPSIVHLNCLN 15
           Y +      ++ V C +CPSI HL+C++
Sbjct: 63  YEDSTPPPSHHRVMCFRCPSISHLSCVS 90


>gb|ADN34038.1| DNA binding protein [Cucumis melo subsp. melo]
          Length = 275

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -2

Query: 278 LRQKMNH-HYQLTTDCDGCSTEEEKWMILHNIRHKGIFRRLCTSCVLKSHPGYFCPICFQ 102
           + +++NH      + C  C   +    ILHN+RHK  FRRLCT+CVLK +   FCP+CF 
Sbjct: 1   MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFD 60

Query: 101 LYSNPHSSIPNNCVKCLKCPSIVHLNCLN 15
           +Y +      ++ V C +CPSI HL+C++
Sbjct: 61  VYEDSTPPPSHHRVMCYRCPSISHLSCVS 89


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