BLASTX nr result

ID: Coptis21_contig00038630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038630
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633574.1| PREDICTED: protein gamma response 1-like [Vi...   180   1e-43
emb|CBI24861.3| unnamed protein product [Vitis vinifera]              180   1e-43
ref|XP_003539645.1| PREDICTED: protein gamma response 1-like [Gl...   170   1e-40
ref|XP_003541617.1| PREDICTED: uncharacterized protein LOC100801...   167   1e-39
ref|XP_002513180.1| retinoblastoma binding protein, putative [Ri...   164   5e-39

>ref|XP_003633574.1| PREDICTED: protein gamma response 1-like [Vitis vinifera]
          Length = 640

 Score =  180 bits (456), Expect = 1e-43
 Identities = 89/136 (65%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
 Frame = +1

Query: 1   GNLNKAQNEEVHDCPAPAPKDMNVDSSDDETQDMGMGAETVPQKQRISITKAGDRNFKYV 180
           GNLNKA+ EE HD P   PKDMN DSSDDETQD+ +  E   QKQ +   K G R FKYV
Sbjct: 507 GNLNKAKKEEYHDLPVAIPKDMNFDSSDDETQDVNV--EPSQQKQPMPAPKPGTRVFKYV 564

Query: 181 EPVRKKSERENLKGFECKQCKKFYDAVLPXXXXXXXXXXXXS-RCEHRDGVSRHRYRYLP 357
           EPVR K+ERENL+G ECKQCKKFYDAVLP            + RCEH +GVSRHRYRY+P
Sbjct: 565 EPVRTKAERENLQGIECKQCKKFYDAVLPKDGNKDTDGNKRNFRCEHHEGVSRHRYRYVP 624

Query: 358 PSTPEGFWNIGFESEM 405
           P TPEGFWNIGF+SEM
Sbjct: 625 PMTPEGFWNIGFDSEM 640


>emb|CBI24861.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  180 bits (456), Expect = 1e-43
 Identities = 89/136 (65%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
 Frame = +1

Query: 1   GNLNKAQNEEVHDCPAPAPKDMNVDSSDDETQDMGMGAETVPQKQRISITKAGDRNFKYV 180
           GNLNKA+ EE HD P   PKDMN DSSDDETQD+ +  E   QKQ +   K G R FKYV
Sbjct: 512 GNLNKAKKEEYHDLPVAIPKDMNFDSSDDETQDVNV--EPSQQKQPMPAPKPGTRVFKYV 569

Query: 181 EPVRKKSERENLKGFECKQCKKFYDAVLPXXXXXXXXXXXXS-RCEHRDGVSRHRYRYLP 357
           EPVR K+ERENL+G ECKQCKKFYDAVLP            + RCEH +GVSRHRYRY+P
Sbjct: 570 EPVRTKAERENLQGIECKQCKKFYDAVLPKDGNKDTDGNKRNFRCEHHEGVSRHRYRYVP 629

Query: 358 PSTPEGFWNIGFESEM 405
           P TPEGFWNIGF+SEM
Sbjct: 630 PMTPEGFWNIGFDSEM 645


>ref|XP_003539645.1| PREDICTED: protein gamma response 1-like [Glycine max]
          Length = 469

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/134 (62%), Positives = 97/134 (72%)
 Frame = +1

Query: 4   NLNKAQNEEVHDCPAPAPKDMNVDSSDDETQDMGMGAETVPQKQRISITKAGDRNFKYVE 183
           N NK  N+E  D P    KD++VDSSDDETQDM   +    ++++ S+T A  R+FKYVE
Sbjct: 338 NFNKDLNKE--DQPCLIQKDISVDSSDDETQDMNAKSSPQKKQKQSSVTVANTRSFKYVE 395

Query: 184 PVRKKSERENLKGFECKQCKKFYDAVLPXXXXXXXXXXXXSRCEHRDGVSRHRYRYLPPS 363
           PVRKK+ERENLKG ECKQC+KFYDAVLP             RCEH DGVSRHRYRY+PP 
Sbjct: 396 PVRKKAERENLKGVECKQCRKFYDAVLPNAAGKDTDSKQNFRCEHLDGVSRHRYRYVPPM 455

Query: 364 TPEGFWNIGFESEM 405
           TPEGFWNIGFESEM
Sbjct: 456 TPEGFWNIGFESEM 469


>ref|XP_003541617.1| PREDICTED: uncharacterized protein LOC100801184 [Glycine max]
          Length = 839

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/134 (61%), Positives = 96/134 (71%)
 Frame = +1

Query: 4   NLNKAQNEEVHDCPAPAPKDMNVDSSDDETQDMGMGAETVPQKQRISITKAGDRNFKYVE 183
           NLNK  N+E  D P    KD++ DSSDDET DM   +    ++++ S+T A  R+FKYVE
Sbjct: 116 NLNKDLNKE--DQPCLIQKDISADSSDDETHDMNAKSSPQKKQKQSSVTVANTRSFKYVE 173

Query: 184 PVRKKSERENLKGFECKQCKKFYDAVLPXXXXXXXXXXXXSRCEHRDGVSRHRYRYLPPS 363
           PVRKK+ERENLKG ECKQC+KFYDAVLP             RCEH DGVSRHRYRY+PP 
Sbjct: 174 PVRKKAERENLKGVECKQCRKFYDAVLPNADGKDADSKQSFRCEHLDGVSRHRYRYVPPM 233

Query: 364 TPEGFWNIGFESEM 405
           TPEGFWNIGFESE+
Sbjct: 234 TPEGFWNIGFESEI 247


>ref|XP_002513180.1| retinoblastoma binding protein, putative [Ricinus communis]
           gi|223547678|gb|EEF49171.1| retinoblastoma binding
           protein, putative [Ricinus communis]
          Length = 632

 Score =  164 bits (416), Expect = 5e-39
 Identities = 79/135 (58%), Positives = 97/135 (71%)
 Frame = +1

Query: 1   GNLNKAQNEEVHDCPAPAPKDMNVDSSDDETQDMGMGAETVPQKQRISITKAGDRNFKYV 180
           G LNKA   + HD   P  +++  +SSDDETQDM +  +  P+KQ++++  AG + FKYV
Sbjct: 501 GTLNKATKGKAHDLEIPV-QNLQPESSDDETQDMNV--DPGPEKQQVTLPVAGQKAFKYV 557

Query: 181 EPVRKKSERENLKGFECKQCKKFYDAVLPXXXXXXXXXXXXSRCEHRDGVSRHRYRYLPP 360
           EPVRKK+ER+NL+G ECKQCKKFYDAVLP             RCEH D VSRHRY+Y+PP
Sbjct: 558 EPVRKKAERKNLQGVECKQCKKFYDAVLPDGGKDAGGNNQNFRCEHHDDVSRHRYKYIPP 617

Query: 361 STPEGFWNIGFESEM 405
            TPEGFWNIGFESEM
Sbjct: 618 MTPEGFWNIGFESEM 632