BLASTX nr result
ID: Coptis21_contig00038630
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038630 (423 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633574.1| PREDICTED: protein gamma response 1-like [Vi... 180 1e-43 emb|CBI24861.3| unnamed protein product [Vitis vinifera] 180 1e-43 ref|XP_003539645.1| PREDICTED: protein gamma response 1-like [Gl... 170 1e-40 ref|XP_003541617.1| PREDICTED: uncharacterized protein LOC100801... 167 1e-39 ref|XP_002513180.1| retinoblastoma binding protein, putative [Ri... 164 5e-39 >ref|XP_003633574.1| PREDICTED: protein gamma response 1-like [Vitis vinifera] Length = 640 Score = 180 bits (456), Expect = 1e-43 Identities = 89/136 (65%), Positives = 99/136 (72%), Gaps = 1/136 (0%) Frame = +1 Query: 1 GNLNKAQNEEVHDCPAPAPKDMNVDSSDDETQDMGMGAETVPQKQRISITKAGDRNFKYV 180 GNLNKA+ EE HD P PKDMN DSSDDETQD+ + E QKQ + K G R FKYV Sbjct: 507 GNLNKAKKEEYHDLPVAIPKDMNFDSSDDETQDVNV--EPSQQKQPMPAPKPGTRVFKYV 564 Query: 181 EPVRKKSERENLKGFECKQCKKFYDAVLPXXXXXXXXXXXXS-RCEHRDGVSRHRYRYLP 357 EPVR K+ERENL+G ECKQCKKFYDAVLP + RCEH +GVSRHRYRY+P Sbjct: 565 EPVRTKAERENLQGIECKQCKKFYDAVLPKDGNKDTDGNKRNFRCEHHEGVSRHRYRYVP 624 Query: 358 PSTPEGFWNIGFESEM 405 P TPEGFWNIGF+SEM Sbjct: 625 PMTPEGFWNIGFDSEM 640 >emb|CBI24861.3| unnamed protein product [Vitis vinifera] Length = 645 Score = 180 bits (456), Expect = 1e-43 Identities = 89/136 (65%), Positives = 99/136 (72%), Gaps = 1/136 (0%) Frame = +1 Query: 1 GNLNKAQNEEVHDCPAPAPKDMNVDSSDDETQDMGMGAETVPQKQRISITKAGDRNFKYV 180 GNLNKA+ EE HD P PKDMN DSSDDETQD+ + E QKQ + K G R FKYV Sbjct: 512 GNLNKAKKEEYHDLPVAIPKDMNFDSSDDETQDVNV--EPSQQKQPMPAPKPGTRVFKYV 569 Query: 181 EPVRKKSERENLKGFECKQCKKFYDAVLPXXXXXXXXXXXXS-RCEHRDGVSRHRYRYLP 357 EPVR K+ERENL+G ECKQCKKFYDAVLP + RCEH +GVSRHRYRY+P Sbjct: 570 EPVRTKAERENLQGIECKQCKKFYDAVLPKDGNKDTDGNKRNFRCEHHEGVSRHRYRYVP 629 Query: 358 PSTPEGFWNIGFESEM 405 P TPEGFWNIGF+SEM Sbjct: 630 PMTPEGFWNIGFDSEM 645 >ref|XP_003539645.1| PREDICTED: protein gamma response 1-like [Glycine max] Length = 469 Score = 170 bits (431), Expect = 1e-40 Identities = 84/134 (62%), Positives = 97/134 (72%) Frame = +1 Query: 4 NLNKAQNEEVHDCPAPAPKDMNVDSSDDETQDMGMGAETVPQKQRISITKAGDRNFKYVE 183 N NK N+E D P KD++VDSSDDETQDM + ++++ S+T A R+FKYVE Sbjct: 338 NFNKDLNKE--DQPCLIQKDISVDSSDDETQDMNAKSSPQKKQKQSSVTVANTRSFKYVE 395 Query: 184 PVRKKSERENLKGFECKQCKKFYDAVLPXXXXXXXXXXXXSRCEHRDGVSRHRYRYLPPS 363 PVRKK+ERENLKG ECKQC+KFYDAVLP RCEH DGVSRHRYRY+PP Sbjct: 396 PVRKKAERENLKGVECKQCRKFYDAVLPNAAGKDTDSKQNFRCEHLDGVSRHRYRYVPPM 455 Query: 364 TPEGFWNIGFESEM 405 TPEGFWNIGFESEM Sbjct: 456 TPEGFWNIGFESEM 469 >ref|XP_003541617.1| PREDICTED: uncharacterized protein LOC100801184 [Glycine max] Length = 839 Score = 167 bits (422), Expect = 1e-39 Identities = 82/134 (61%), Positives = 96/134 (71%) Frame = +1 Query: 4 NLNKAQNEEVHDCPAPAPKDMNVDSSDDETQDMGMGAETVPQKQRISITKAGDRNFKYVE 183 NLNK N+E D P KD++ DSSDDET DM + ++++ S+T A R+FKYVE Sbjct: 116 NLNKDLNKE--DQPCLIQKDISADSSDDETHDMNAKSSPQKKQKQSSVTVANTRSFKYVE 173 Query: 184 PVRKKSERENLKGFECKQCKKFYDAVLPXXXXXXXXXXXXSRCEHRDGVSRHRYRYLPPS 363 PVRKK+ERENLKG ECKQC+KFYDAVLP RCEH DGVSRHRYRY+PP Sbjct: 174 PVRKKAERENLKGVECKQCRKFYDAVLPNADGKDADSKQSFRCEHLDGVSRHRYRYVPPM 233 Query: 364 TPEGFWNIGFESEM 405 TPEGFWNIGFESE+ Sbjct: 234 TPEGFWNIGFESEI 247 >ref|XP_002513180.1| retinoblastoma binding protein, putative [Ricinus communis] gi|223547678|gb|EEF49171.1| retinoblastoma binding protein, putative [Ricinus communis] Length = 632 Score = 164 bits (416), Expect = 5e-39 Identities = 79/135 (58%), Positives = 97/135 (71%) Frame = +1 Query: 1 GNLNKAQNEEVHDCPAPAPKDMNVDSSDDETQDMGMGAETVPQKQRISITKAGDRNFKYV 180 G LNKA + HD P +++ +SSDDETQDM + + P+KQ++++ AG + FKYV Sbjct: 501 GTLNKATKGKAHDLEIPV-QNLQPESSDDETQDMNV--DPGPEKQQVTLPVAGQKAFKYV 557 Query: 181 EPVRKKSERENLKGFECKQCKKFYDAVLPXXXXXXXXXXXXSRCEHRDGVSRHRYRYLPP 360 EPVRKK+ER+NL+G ECKQCKKFYDAVLP RCEH D VSRHRY+Y+PP Sbjct: 558 EPVRKKAERKNLQGVECKQCKKFYDAVLPDGGKDAGGNNQNFRCEHHDDVSRHRYKYIPP 617 Query: 361 STPEGFWNIGFESEM 405 TPEGFWNIGFESEM Sbjct: 618 MTPEGFWNIGFESEM 632