BLASTX nr result

ID: Coptis21_contig00038628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038628
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   107   1e-21
gb|EEC83650.1| hypothetical protein OsI_29398 [Oryza sativa Indi...   105   4e-21
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   104   8e-21
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   103   1e-20
gb|AAV43830.1| hypothetical protein [Oryza sativa Japonica Group...   103   1e-20

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/91 (54%), Positives = 66/91 (72%)
 Frame = +1

Query: 1   NVGLACEVFHNMKHMKTKNEGWIALKLDMAKAYDRVEWKFMDGIFEKLGFTEKWRHMIHQ 180
           N+ +A EVFH+ K+ KT   GWIA+KLDM KAYDR+EWK++    +K+GF+  W   I  
Sbjct: 565 NILIAHEVFHSFKN-KTGRGGWIAIKLDMEKAYDRLEWKYIYTTMDKMGFSPIWIEWIRS 623

Query: 181 CVSTVSFQVLLNGSPIEKFSPERGLRQGDPL 273
           C+S+ SF VL+NG P E+F P RG+RQGDPL
Sbjct: 624 CISSASFSVLVNGIPGERFFPSRGIRQGDPL 654


>gb|EEC83650.1| hypothetical protein OsI_29398 [Oryza sativa Indica Group]
          Length = 1212

 Score =  105 bits (262), Expect = 4e-21
 Identities = 45/91 (49%), Positives = 66/91 (72%)
 Frame = +1

Query: 1   NVGLACEVFHNMKHMKTKNEGWIALKLDMAKAYDRVEWKFMDGIFEKLGFTEKWRHMIHQ 180
           N  +A E FH+++    +N+ + ALKLD++KAYD V+W+F+DG+ E++GF +KW+  I  
Sbjct: 530 NALIAFECFHSIQKCNRENQNFCALKLDLSKAYDHVDWQFLDGVMERMGFCDKWQSWIMA 589

Query: 181 CVSTVSFQVLLNGSPIEKFSPERGLRQGDPL 273
           CV++V + V  NG  +E FSP RGLRQGDPL
Sbjct: 590 CVTSVQYSVRFNGHLLEPFSPTRGLRQGDPL 620


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  104 bits (259), Expect = 8e-21
 Identities = 47/91 (51%), Positives = 67/91 (73%)
 Frame = +1

Query: 1   NVGLACEVFHNMKHMKTKNEGWIALKLDMAKAYDRVEWKFMDGIFEKLGFTEKWRHMIHQ 180
           NV LA E+ H++K +K    G  A+KLDM+KAYDRVEW F++ +  K+GF EKW  +I +
Sbjct: 130 NVLLAYEIVHHLKSIKKGAGGLAAIKLDMSKAYDRVEWSFLENMMRKMGFDEKWVQLIMK 189

Query: 181 CVSTVSFQVLLNGSPIEKFSPERGLRQGDPL 273
           CV+TV++++ +N S  +K  P+RGLRQGDPL
Sbjct: 190 CVTTVTYKIKVNDSYTQKIFPQRGLRQGDPL 220


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/91 (50%), Positives = 62/91 (68%)
 Frame = +1

Query: 1    NVGLACEVFHNMKHMKTKNEGWIALKLDMAKAYDRVEWKFMDGIFEKLGFTEKWRHMIHQ 180
            NV +A E++H++K  ++ N G   LKLDM KAYDRVEW F++ +  K+GF + W  ++  
Sbjct: 1158 NVIIAHEIYHHLKLTRSCNNGAFGLKLDMNKAYDRVEWNFLEAVLRKMGFVDSWIGLVMS 1217

Query: 181  CVSTVSFQVLLNGSPIEKFSPERGLRQGDPL 273
            CV+T S  VL+NG P   F P RGLRQGDPL
Sbjct: 1218 CVTTSSLSVLINGKPGPSFLPSRGLRQGDPL 1248


>gb|AAV43830.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|55168038|gb|AAV43906.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 697

 Score =  103 bits (257), Expect = 1e-20
 Identities = 43/91 (47%), Positives = 66/91 (72%)
 Frame = +1

Query: 1   NVGLACEVFHNMKHMKTKNEGWIALKLDMAKAYDRVEWKFMDGIFEKLGFTEKWRHMIHQ 180
           N  +A E FH ++  K +N+ + ALKLD++KAYDRV+W F+DG+ +++GF E WR     
Sbjct: 118 NALIAFECFHAIQKCKRENQNFCALKLDLSKAYDRVDWAFLDGVLQRMGFGESWRKWTMS 177

Query: 181 CVSTVSFQVLLNGSPIEKFSPERGLRQGDPL 273
           C+++V + + LNG+ ++ F+P RGLRQGDPL
Sbjct: 178 CMTSVRYSICLNGNLLDPFTPTRGLRQGDPL 208


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