BLASTX nr result

ID: Coptis21_contig00038625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038625
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334089.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002330141.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002334089.1| predicted protein [Populus trichocarpa] gi|222839595|gb|EEE77932.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = +1

Query: 7   LLADFSTTKET*SFLQCHVLQQSVANATRIRFQLLSTSKRNRSITEYLQHAKSLADSLVS 186
           L   F T+K     L+ H  Q+SVA+AT ++ QLL  +K  +S+  YL+HAKS+AD+L+S
Sbjct: 95  LTIGFDTSKAIWDCLERHFSQKSVASATNLKMQLLDLNKGTQSVDTYLRHAKSIADALIS 154

Query: 187 FNKPV-NKDLITA 222
            NKPV ++DL+ A
Sbjct: 155 INKPVPDEDLVIA 167


>ref|XP_002330141.1| predicted protein [Populus trichocarpa] gi|222871275|gb|EEF08406.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/53 (52%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
 Frame = +1

Query: 67  QQSVANATRIRFQLLSTSKRNRSITEYLQHAKSLADSLVSFNKPV-NKDLITA 222
           Q SVA+AT ++ QLL  +K  +S+  YL+HAKS+AD+L+S NKPV ++DL+ A
Sbjct: 79  QISVASATNLKMQLLDLNKGTQSVDTYLRHAKSIADALISINKPVPDEDLVIA 131


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