BLASTX nr result

ID: Coptis21_contig00038605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038605
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520750.1| conserved hypothetical protein [Ricinus comm...   111   7e-23
ref|XP_002307579.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002300849.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
emb|CBI26209.3| unnamed protein product [Vitis vinifera]               96   3e-18
emb|CBI26596.3| unnamed protein product [Vitis vinifera]               96   4e-18

>ref|XP_002520750.1| conserved hypothetical protein [Ricinus communis]
           gi|223540135|gb|EEF41712.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score =  111 bits (277), Expect = 7e-23
 Identities = 74/183 (40%), Positives = 96/183 (52%), Gaps = 14/183 (7%)
 Frame = -3

Query: 508 TESLGSETGSDIGDDNDMYNXXXXXXXXXXXSPTRVRSRFCHLPQKKTTRR-SFPPPLTS 332
           TESLGSETGSD  + +D              +  R +SR      K+TTR  SFPPPLTS
Sbjct: 118 TESLGSETGSDGSESSDEMALLSLENVRNYEARLRPKSR----ETKRTTRTASFPPPLTS 173

Query: 331 ISGSDYVQFTPHREGGRLVIKAVTIASTPTCFEAERAHGRLRLHLAKNHNNSD------- 173
           ISGS  VQ  PHREGGRL+++AV+++S    F AER  GRLRLHL  N++  +       
Sbjct: 174 ISGSTNVQVRPHREGGRLILEAVSVSSCEAFFHAERIDGRLRLHLISNNDKEEEEEEEEL 233

Query: 172 ------EDTTDKEKKVQEQVHYTCLNEKKNGNTCTVESEKAIVKYQRPCRYKDNGHGNKS 11
                 ED   +E    E        E++NG       EK + K  RP R K++  G+ S
Sbjct: 234 NEILVQEDGDGEESSEAEDEEVDGNGEEENGGNS--GGEKGMEKLPRPSRCKESESGSNS 291

Query: 10  LLN 2
           +LN
Sbjct: 292 MLN 294


>ref|XP_002307579.1| predicted protein [Populus trichocarpa] gi|222857028|gb|EEE94575.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  100 bits (248), Expect = 2e-19
 Identities = 72/195 (36%), Positives = 95/195 (48%), Gaps = 26/195 (13%)
 Frame = -3

Query: 508 TESLGSETGSDIGDDNDMYNXXXXXXXXXXXSPTRVRSRFCHLPQKKTTRR-----SFPP 344
           TESLGSETGS++ + +D                T         P+ +  RR     SFPP
Sbjct: 101 TESLGSETGSEMSESSDDMAVLPLENVNYETRET---------PKSREARRTSRSVSFPP 151

Query: 343 PLTSISGSDYVQFTPHREGGRLVIKAVTIASTPTCFEAERAHGRLRLHLAKNH---NNSD 173
           PL+SISGS+ V+  PHREGGRLV++AVTI+S      AER  GRLRLHL  NH   NN D
Sbjct: 152 PLSSISGSNNVRVRPHREGGRLVLEAVTISSCHVYLHAERTDGRLRLHL-MNHCSSNNFD 210

Query: 172 EDTTDKEKKVQEQVHYT------------------CLNEKKNGNTCTVESEKAIVKYQRP 47
            +  + E +  E++                        E+  G++     E  + K  RP
Sbjct: 211 NEEEEAEAESGEEIVVEEDGDDDQSGDNEAEGGDGIWGEELEGSSVNTGGEMGMGKLARP 270

Query: 46  CRYKDNGHGNKSLLN 2
            R K+ G  +KSLLN
Sbjct: 271 GRCKEGGSSSKSLLN 285


>ref|XP_002300849.1| predicted protein [Populus trichocarpa] gi|222842575|gb|EEE80122.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 72/191 (37%), Positives = 94/191 (49%), Gaps = 22/191 (11%)
 Frame = -3

Query: 508 TESLGSETGSDIGDDNDMYNXXXXXXXXXXXSPTRVRSRFCHLPQKKTTRRS--FPPPLT 335
           TE LGSETGS+  +  D                TR   +   L + +TT RS  FPPPL+
Sbjct: 108 TEGLGSETGSEGSESRD---GMAFLSLENVDHETRAAPK---LRETRTTSRSVSFPPPLS 161

Query: 334 SISGSDYVQFTPHREGGRLVIKAVTIASTPTCFEAERAHGRLRLHLAKNH--NNSDEDTT 161
           SISGS+ V+  PHREGGRLV++AVT++S      AER  GRLRLHL K+   NN D +  
Sbjct: 162 SISGSNNVRVRPHREGGRLVLEAVTVSSCHVHLHAERTDGRLRLHLMKDSSPNNFDNEVQ 221

Query: 160 DKEKKVQEQVHY------------------TCLNEKKNGNTCTVESEKAIVKYQRPCRYK 35
           + E +  E+V                        E+  G   +V  E  + K  RP R K
Sbjct: 222 EAEAEYGEEVVVQDDGGDDQSGDDEAGGGGDICGEELEGINGSVGGEMGMGKLARPGRCK 281

Query: 34  DNGHGNKSLLN 2
            +G  N+ LLN
Sbjct: 282 QSGSSNEGLLN 292


>emb|CBI26209.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 67/195 (34%), Positives = 96/195 (49%), Gaps = 26/195 (13%)
 Frame = -3

Query: 508 TESLGSETGSDIGDDNDMYNXXXXXXXXXXXSPTRVRSRFCHLPQKKTTRRSFPPPLTSI 329
           TE LGSETG+ + + N M+                +      L   K   ++FPPPLT+I
Sbjct: 178 TEDLGSETGTHVVE-NTMFAVPASASEPGDCPSRELLQSRQLLRATKANSQNFPPPLTTI 236

Query: 328 SGSDYVQFTPHREGGRLVIKAVTIASTPTCFEAERAHGRLRLHLAKNHNNS--------- 176
           SGS+ +Q  PHRE GRL++KAV  +   T F+ ER+ GRLRL L K+  ++         
Sbjct: 237 SGSNSLQIRPHREDGRLIMKAVKASLAHTLFQVERSEGRLRLCLLKDPTSNLDWQVAAQE 296

Query: 175 -DEDTTDKEKKVQEQV---------------HYTCLNEKKNGNTCTVESEKAIVKYQRPC 44
            +ED  ++E++ +E+V                    +E+  G    V  E  + KYQRP 
Sbjct: 297 KEEDIEEEEEEEEEEVVEEEEEDGDEQDEEDGEFNWSEEMEGKNMEVGVEMGMEKYQRPS 356

Query: 43  RYKD-NGHGNKSLLN 2
           R K+  GHG K LLN
Sbjct: 357 RCKEGGGHGRKGLLN 371


>emb|CBI26596.3| unnamed protein product [Vitis vinifera]
          Length = 422

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 72/196 (36%), Positives = 90/196 (45%), Gaps = 27/196 (13%)
 Frame = -3

Query: 508 TESLGSETGSDIGDDNDMYNXXXXXXXXXXXSPTRVRSRFCHLPQKKTTRRSFPPPLTSI 329
           TESLGSETGS     ND              +    +     +  K    RSFPPPL+SI
Sbjct: 219 TESLGSETGSYTSKSNDEDPLLALKSGKIFTAREPSKEPEIGVTGKMNGSRSFPPPLSSI 278

Query: 328 SGSDYVQFTPHREGGRLVIKAVTIASTPTCFEAERAHGRLRLHLAK------NHNNSDED 167
           S  D VQ  PHR GGRLVIKAV++ +  T F AER  GRLRL   K      +H + ++D
Sbjct: 279 SSLDCVQVRPHRVGGRLVIKAVSVGTCHTYFHAERGDGRLRLRFLKGCSQNFDHEDDEDD 338

Query: 166 TTDK-----------EKKVQEQVHYTCLN---------EKKNGNTCTVESEKAIVKYQRP 47
             D+           E++ ++  +  C           E   G +  V  E  I K QRP
Sbjct: 339 GEDEFFEEVEDFEGGEEEEEDDYYEDCDEDDGDSLYWCEDIEGKSGNVGVEIGIEKLQRP 398

Query: 46  CR-YKDNGHGNKSLLN 2
            R  K  GHG  SLLN
Sbjct: 399 TRCMKGGGHGGNSLLN 414


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