BLASTX nr result

ID: Coptis21_contig00038597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038597
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301496.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002320986.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002515318.1| hypothetical protein RCOM_1348010 [Ricinus c...    72   4e-11
ref|XP_002314923.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_003594807.1| Zinc finger protein-like protein [Medicago t...    66   3e-09

>ref|XP_002301496.1| predicted protein [Populus trichocarpa] gi|222843222|gb|EEE80769.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
 Frame = +1

Query: 91  SDQKPTSTLRLFGFSVTQQHDTATS--DQTSEVKKFECQFCHREFANSQALGGHQNAH 258
           SDQK TS L+LFGF +T+Q D   S  + + E +KFEC FCHR FANSQALGGHQNAH
Sbjct: 11  SDQKTTSKLKLFGFPLTEQDDEILSKTENSLENRKFECHFCHRAFANSQALGGHQNAH 68


>ref|XP_002320986.1| predicted protein [Populus trichocarpa] gi|222861759|gb|EEE99301.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
 Frame = +1

Query: 91  SDQKPTSTLRLFGFSVTQQHDTAT-SDQTSEVKKFECQFCHREFANSQALGGHQNAH 258
           SD K TS L+LFGF +T+Q +  + ++ T   +KFEC FCHR FANSQALGGHQNAH
Sbjct: 11  SDHKATSKLKLFGFPLTEQDEILSKTENTLGNRKFECHFCHRAFANSQALGGHQNAH 67


>ref|XP_002515318.1| hypothetical protein RCOM_1348010 [Ricinus communis]
           gi|223545798|gb|EEF47302.1| hypothetical protein
           RCOM_1348010 [Ricinus communis]
          Length = 196

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 11/72 (15%)
 Frame = +1

Query: 76  SSRKPSDQ---KPTSTLRLFGFSVTQ-QHDTATSDQTS-------EVKKFECQFCHREFA 222
           SS  PS Q   KP+S L+LFGF++ + + D A S +T+       E++KFEC FC R FA
Sbjct: 4   SSSTPSQQSHHKPSSALKLFGFTLIEHEQDVAKSGETTSSNCSSVEIRKFECHFCGRAFA 63

Query: 223 NSQALGGHQNAH 258
           NSQALGGHQNAH
Sbjct: 64  NSQALGGHQNAH 75


>ref|XP_002314923.1| predicted protein [Populus trichocarpa] gi|222863963|gb|EEF01094.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
 Frame = +1

Query: 88  PSDQKPTSTLRLFGFSVTQQHD---TATSDQTSEVKKFECQFCHREFANSQALGGHQNAH 258
           P  + P+STL+L GFSV +  +     T      +KKFECQ+CHR FANSQALGGHQNAH
Sbjct: 12  PQKKPPSSTLKLLGFSVKRYQEELPATTPFNIEYIKKFECQYCHRGFANSQALGGHQNAH 71


>ref|XP_003594807.1| Zinc finger protein-like protein [Medicago truncatula]
           gi|355483855|gb|AES65058.1| Zinc finger protein-like
           protein [Medicago truncatula]
          Length = 167

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/76 (47%), Positives = 45/76 (59%)
 Frame = +1

Query: 31  MEEGSSPTKSFNEEVSSRKPSDQKPTSTLRLFGFSVTQQHDTATSDQTSEVKKFECQFCH 210
           M   SS     N E    KPS   P+S ++LFGFS+T  +   +++     K+F C FCH
Sbjct: 1   MSSSSSKNPMHNSE---EKPSSS-PSSPVKLFGFSLTPSNTLPSNN-----KRFICHFCH 51

Query: 211 REFANSQALGGHQNAH 258
           REF N QALGGHQNAH
Sbjct: 52  REFTNCQALGGHQNAH 67


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