BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038589
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEA48974.1| rubisco activase, partial [Rosa roxburghii]            197   6e-49
gb|ABB20913.1| ribulose-1,5-bisphosphate carboxylase/oxygenase a...   197   7e-49
gb|AFV93502.1| chloroplast ribulose bisphosphate carboxylase/oxy...   197   7e-49
gb|AFV93498.1| chloroplast ribulose bisphosphate carboxylase/oxy...   197   7e-49
ref|NP_001240245.1| ribulose bisphosphate carboxylase/oxygenase ...   197   1e-48

>gb|AEA48974.1| rubisco activase, partial [Rosa roxburghii]
          Length = 265

 Score =  197 bits (502), Expect = 6e-49
 Identities = 93/109 (85%), Positives = 105/109 (96%)
 Frame = -1

Query: 418 ESDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWINDVGIDGIGKKLVNSRDGPPTFEQP 239
           +SDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWI+ VG+DG+GKKLVNS++GPPTFEQP
Sbjct: 155 QSDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDGVGKKLVNSKEGPPTFEQP 214

Query: 238 KMTVEKLLEYGNMLVMEQDNVKRVQLAEKYLNEAALGDANADAMSRGKF 92
           KMT+EKLLEYGNMLV EQ+NVKRVQLA++YLNEAALGDAN+DA+ RG F
Sbjct: 215 KMTIEKLLEYGNMLVQEQENVKRVQLADQYLNEAALGDANSDAIDRGTF 263


>gb|ABB20913.1| ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2
           [Gossypium hirsutum]
          Length = 421

 Score =  197 bits (501), Expect = 7e-49
 Identities = 93/110 (84%), Positives = 105/110 (95%)
 Frame = -1

Query: 421 PESDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWINDVGIDGIGKKLVNSRDGPPTFEQ 242
           P+ DIVKLVDTFPGQSIDFFGALRARVYDDEVRKWI+DVG+ G+GKKLVNSRDGPPTFEQ
Sbjct: 273 PDEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISDVGVAGVGKKLVNSRDGPPTFEQ 332

Query: 241 PKMTVEKLLEYGNMLVMEQDNVKRVQLAEKYLNEAALGDANADAMSRGKF 92
           PKMT+EKLLEYGNMLV EQ+NVKRVQLA+KYL+EAALG+AN D+++RG F
Sbjct: 333 PKMTIEKLLEYGNMLVAEQENVKRVQLADKYLSEAALGEANEDSINRGTF 382


>gb|AFV93502.1| chloroplast ribulose bisphosphate carboxylase/oxygenase activase
           alpha 2, partial [Gossypium barbadense]
          Length = 344

 Score =  197 bits (501), Expect = 7e-49
 Identities = 93/110 (84%), Positives = 105/110 (95%)
 Frame = -1

Query: 421 PESDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWINDVGIDGIGKKLVNSRDGPPTFEQ 242
           P+ DIVKLVDTFPGQSIDFFGALRARVYDDEVRKWI+DVG+ G+GKKLVNSRDGPPTFEQ
Sbjct: 234 PDEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISDVGVAGVGKKLVNSRDGPPTFEQ 293

Query: 241 PKMTVEKLLEYGNMLVMEQDNVKRVQLAEKYLNEAALGDANADAMSRGKF 92
           PKMT+EKLLEYGNMLV EQ+NVKRVQLA+KYL+EAALG+AN D+++RG F
Sbjct: 294 PKMTIEKLLEYGNMLVAEQENVKRVQLADKYLSEAALGEANEDSINRGTF 343


>gb|AFV93498.1| chloroplast ribulose bisphosphate carboxylase/oxygenase activase
           alpha 2, partial [Gossypium barbadense]
          Length = 371

 Score =  197 bits (501), Expect = 7e-49
 Identities = 93/110 (84%), Positives = 105/110 (95%)
 Frame = -1

Query: 421 PESDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWINDVGIDGIGKKLVNSRDGPPTFEQ 242
           P+ DIVKLVDTFPGQSIDFFGALRARVYDDEVRKWI+DVG+ G+GKKLVNSRDGPPTFEQ
Sbjct: 254 PDEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISDVGVAGVGKKLVNSRDGPPTFEQ 313

Query: 241 PKMTVEKLLEYGNMLVMEQDNVKRVQLAEKYLNEAALGDANADAMSRGKF 92
           PKMT+EKLLEYGNMLV EQ+NVKRVQLA+KYL+EAALG+AN D+++RG F
Sbjct: 314 PKMTIEKLLEYGNMLVAEQENVKRVQLADKYLSEAALGEANEDSINRGTF 363


>ref|NP_001240245.1| ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Glycine max]
           gi|290766485|gb|ADD60245.1| rubisco activase [Glycine
           max]
          Length = 443

 Score =  197 bits (500), Expect = 1e-48
 Identities = 93/110 (84%), Positives = 104/110 (94%)
 Frame = -1

Query: 421 PESDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWINDVGIDGIGKKLVNSRDGPPTFEQ 242
           PE D+VK+VDTFPGQSIDFFGALRARVYDDEVRKWI+ VG+DGIGKKLVNS+DGPPTFEQ
Sbjct: 331 PEQDVVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDGIGKKLVNSKDGPPTFEQ 390

Query: 241 PKMTVEKLLEYGNMLVMEQDNVKRVQLAEKYLNEAALGDANADAMSRGKF 92
           PKMT+EKLL YGNMLV EQ+NVKRVQLA+KYLNEAALG+AN DA++RG F
Sbjct: 391 PKMTLEKLLTYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAINRGTF 440