BLASTX nr result

ID: Coptis21_contig00038573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038573
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16548.3| unnamed protein product [Vitis vinifera]              101   6e-20
ref|XP_002283728.2| PREDICTED: LRR receptor-like serine/threonin...   101   7e-20
ref|XP_002523410.1| serine-threonine protein kinase, plant-type,...   100   1e-19
ref|XP_002297619.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002283740.1| PREDICTED: LRR receptor-like serine/threonin...    99   5e-19

>emb|CBI16548.3| unnamed protein product [Vitis vinifera]
          Length = 690

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/73 (69%), Positives = 56/73 (76%)
 Frame = -2

Query: 219 EIPTNIGTLSNISTLALSRNQLTGGIPLSLQKLSKLATLQLDSNLLSGDIPIWLLDIKAL 40
           EIPT IG L NISTLALS N+LTGGIP S+QKLSKL  L L +NLL+G+IP WL   K L
Sbjct: 308 EIPTEIGNLPNISTLALSNNRLTGGIPSSMQKLSKLEKLYLQNNLLTGEIPSWLFHFKGL 367

Query: 39  RVLNLGGNNLTWN 1
           R L LGGN LTWN
Sbjct: 368 RDLYLGGNRLTWN 380



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/69 (43%), Positives = 43/69 (62%)
 Frame = -2

Query: 219 EIPTNIGTLSNISTLALSRNQLTGGIPLSLQKLSKLATLQLDSNLLSGDIPIWLLDIKAL 40
           E+PT     +    LAL  N+ +GG+PL+L  LSKL  L+L  N L+G++P +L  I  L
Sbjct: 461 EVPTTFPKETRF--LALGGNKFSGGLPLNLTNLSKLERLELQDNNLTGELPNFLSQISTL 518

Query: 39  RVLNLGGNN 13
           +VLNL  N+
Sbjct: 519 QVLNLRNNS 527


>ref|XP_002283728.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           GSO2-like [Vitis vinifera]
          Length = 827

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/73 (69%), Positives = 56/73 (76%)
 Frame = -2

Query: 219 EIPTNIGTLSNISTLALSRNQLTGGIPLSLQKLSKLATLQLDSNLLSGDIPIWLLDIKAL 40
           EIPT IG L NISTLALS N+LTGGIP S+QKLSKL  L L +NLL+G+IP WL   K L
Sbjct: 245 EIPTEIGNLPNISTLALSNNRLTGGIPSSMQKLSKLEQLYLHNNLLTGEIPSWLFHFKGL 304

Query: 39  RVLNLGGNNLTWN 1
           R L LGGN LTWN
Sbjct: 305 RDLYLGGNRLTWN 317



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/55 (52%), Positives = 39/55 (70%)
 Frame = -2

Query: 177 LALSRNQLTGGIPLSLQKLSKLATLQLDSNLLSGDIPIWLLDIKALRVLNLGGNN 13
           LALS N+L+GG+PL+L  LS L  LQL  N L+G++P +L  I  L+VLNL  N+
Sbjct: 495 LALSGNKLSGGLPLNLTNLSNLERLQLQDNNLTGELPNFLSQISTLQVLNLRNNS 549



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/70 (40%), Positives = 41/70 (58%)
 Frame = -2

Query: 216 IPTNIGTLSNISTLALSRNQLTGGIPLSLQKLSKLATLQLDSNLLSGDIPIWLLDIKALR 37
           +P N+  LSN+  L L  N LTG +P  L ++S L  L L +N   G IP  + ++  LR
Sbjct: 506 LPLNLTNLSNLERLQLQDNNLTGELPNFLSQISTLQVLNLRNNSFQGLIPESIFNLSNLR 565

Query: 36  VLNLGGNNLT 7
           +L++  NNLT
Sbjct: 566 ILDVSSNNLT 575


>ref|XP_002523410.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223537360|gb|EEF38989.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 816

 Score =  100 bits (250), Expect = 1e-19
 Identities = 48/73 (65%), Positives = 58/73 (79%)
 Frame = -2

Query: 219 EIPTNIGTLSNISTLALSRNQLTGGIPLSLQKLSKLATLQLDSNLLSGDIPIWLLDIKAL 40
           EIP NIG L+N++TLALS N++TGGIP S+QKLSKL  L+L  N L+G IP WL DIK+L
Sbjct: 250 EIPANIGDLTNLTTLALSNNRITGGIPTSIQKLSKLKVLRLQDNFLAGRIPTWLFDIKSL 309

Query: 39  RVLNLGGNNLTWN 1
             L LGGNNLTW+
Sbjct: 310 AELFLGGNNLTWD 322



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/71 (42%), Positives = 41/71 (57%)
 Frame = -2

Query: 219 EIPTNIGTLSNISTLALSRNQLTGGIPLSLQKLSKLATLQLDSNLLSGDIPIWLLDIKAL 40
           EIPT++G L  +  L +S N L+GGIP S   L  +  L L  N LSG IP  L  ++ L
Sbjct: 648 EIPTSLGLLKGLKILNISYNHLSGGIPESFGDLESVEGLDLSHNRLSGSIPSTLSKLQEL 707

Query: 39  RVLNLGGNNLT 7
             L++  NNL+
Sbjct: 708 ATLDVSNNNLS 718


>ref|XP_002297619.1| predicted protein [Populus trichocarpa] gi|222844877|gb|EEE82424.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/73 (65%), Positives = 61/73 (83%)
 Frame = -2

Query: 219 EIPTNIGTLSNISTLALSRNQLTGGIPLSLQKLSKLATLQLDSNLLSGDIPIWLLDIKAL 40
           EIP +IG L+N++TLALS N++TGGI  S+QKL KL TL+L++N+LSG IP WL DIK+L
Sbjct: 242 EIPKDIGDLTNLTTLALSGNRMTGGITSSIQKLHKLETLRLENNVLSGGIPTWLFDIKSL 301

Query: 39  RVLNLGGNNLTWN 1
           + L LGGNNLTWN
Sbjct: 302 KDLFLGGNNLTWN 314



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/71 (36%), Positives = 46/71 (64%)
 Frame = -2

Query: 219 EIPTNIGTLSNISTLALSRNQLTGGIPLSLQKLSKLATLQLDSNLLSGDIPIWLLDIKAL 40
           ++P+N+  L+N+  L L  N++ G +P+SL ++S L  L L +N L G IP  + ++  L
Sbjct: 502 KLPSNLTDLNNLEHLDLHDNRIAGELPMSLSQMSTLQVLNLRNNTLEGSIPSTITNLTNL 561

Query: 39  RVLNLGGNNLT 7
           R+L++  NNL+
Sbjct: 562 RILDVSSNNLS 572


>ref|XP_002283740.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1
           [Vitis vinifera]
          Length = 814

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/73 (65%), Positives = 58/73 (79%)
 Frame = -2

Query: 219 EIPTNIGTLSNISTLALSRNQLTGGIPLSLQKLSKLATLQLDSNLLSGDIPIWLLDIKAL 40
           EIP +IG L NISTL L+ NQLTGGIP S+QKLSKL TL L++NLL+G+I  WL D+K L
Sbjct: 245 EIPIDIGNLPNISTLTLNDNQLTGGIPSSIQKLSKLETLHLENNLLTGEISSWLFDLKGL 304

Query: 39  RVLNLGGNNLTWN 1
           + L LG N+LTWN
Sbjct: 305 KNLYLGSNSLTWN 317


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