BLASTX nr result

ID: Coptis21_contig00038572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038572
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516088.1| conserved hypothetical protein [Ricinus comm...    97   1e-18
ref|XP_003588966.1| hypothetical protein MTR_1g015840 [Medicago ...    73   3e-11
ref|XP_002308548.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_003603168.1| hypothetical protein MTR_3g104620 [Medicago ...    65   1e-08
ref|XP_002966858.1| hypothetical protein SELMODRAFT_408071 [Sela...    60   3e-07

>ref|XP_002516088.1| conserved hypothetical protein [Ricinus communis]
           gi|223544574|gb|EEF46090.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 54/102 (52%), Positives = 71/102 (69%), Gaps = 7/102 (6%)
 Frame = -3

Query: 558 LLTIRTQRRRLSASLSVKL--SGILSRKEEQQQP----KQMESKPEDSIWTKTIMLGEKC 397
           LLT     R L  ++S+K+  S  ++RK++Q+      K+ + K EDSIW KTI+LGEKC
Sbjct: 118 LLTKSASTRNLVRNMSIKIPRSMSMARKDQQEDKIYHKKKGKLKHEDSIWMKTIILGEKC 177

Query: 396 KVPDEE-DAIIYDERGNRLSAYPVRTPRSLPVSRSNSFSVPS 274
           KVPDE+ DA IYD +GNR++ Y  +TPRSLPVSR NSF  PS
Sbjct: 178 KVPDEDQDAAIYDSKGNRITTYHPKTPRSLPVSRQNSFIEPS 219


>ref|XP_003588966.1| hypothetical protein MTR_1g015840 [Medicago truncatula]
           gi|355478014|gb|AES59217.1| hypothetical protein
           MTR_1g015840 [Medicago truncatula]
          Length = 232

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
 Frame = -3

Query: 543 TQRRRLSASLSVKLSGILS------RKEEQQQPKQMESKPEDSIWTKTIMLGEKCKVPDE 382
           T  RRLS  LS+K+   LS      +KEE     + + KP++SIW KTI+LGEKC   +E
Sbjct: 129 TSERRLSFKLSIKMPRSLSLARNWDKKEENDIGNREKLKPDESIWMKTIILGEKCVPDEE 188

Query: 381 EDAIIYDERGNRLSAYPVRTPRSLPVSRSNSFS 283
           EDAIIY+ +G R+SAY    PR+   S S S S
Sbjct: 189 EDAIIYEGKGKRISAY---HPRNSISSSSMSLS 218


>ref|XP_002308548.1| predicted protein [Populus trichocarpa] gi|222854524|gb|EEE92071.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
 Frame = -3

Query: 519 SLSVKLSGILSRKE---EQQQPKQMESKPEDSIWTKTIMLGEKCKVPDEEDAIIYDERGN 349
           S+ +  S  L RK+   ++ Q K+ + K EDS+W KTI+LGEKCKVPDE++A+IYD +G 
Sbjct: 123 SMKLPRSMSLVRKDGDDKKNQKKKGKPKHEDSVWMKTIILGEKCKVPDEDEAVIYDGKGK 182

Query: 348 RLSAYPVRTPRSLPVSRSNSFSVPS 274
           R+S Y  +   S   S+ +  ++PS
Sbjct: 183 RISTYHKKASCSRQNSQIDLNAIPS 207


>ref|XP_003603168.1| hypothetical protein MTR_3g104620 [Medicago truncatula]
           gi|355492216|gb|AES73419.1| hypothetical protein
           MTR_3g104620 [Medicago truncatula]
          Length = 243

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 9/95 (9%)
 Frame = -3

Query: 543 TQRRRLSASLSVKLSGI---LSRKEEQQQPKQMESKP----EDSIWTKTIMLGEKCKVPD 385
           T  RR S SLS+K+  +   LS  +     K+ + KP    E+S+W KTI+LG+KC   +
Sbjct: 128 TSERRTSFSLSIKMPTLPRNLSIAKNWDHLKEEKFKPLVKTEESVWMKTIILGDKCVPDE 187

Query: 384 EEDAIIYDERGNRLSAYPVRT--PRSLPVSRSNSF 286
           E+D +I++ +G ++SAY  +T    S+ +SR NSF
Sbjct: 188 EDDPVIFEGKGKKISAYHPKTISSMSMSISRQNSF 222


>ref|XP_002966858.1| hypothetical protein SELMODRAFT_408071 [Selaginella moellendorffii]
           gi|300164849|gb|EFJ31457.1| hypothetical protein
           SELMODRAFT_408071 [Selaginella moellendorffii]
          Length = 136

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 12/77 (15%)
 Frame = -3

Query: 507 KLSGILSRKE----------EQQQPKQMESKPEDS--IWTKTIMLGEKCKVPDEEDAIIY 364
           KL  +  RKE          EQQ  KQ +   E++  +W +TI++GEKC+ PD    I+Y
Sbjct: 52  KLKWLSKRKEAKRKAALLRVEQQYRKQDDMFWENTGAVWQRTILMGEKCEPPDFSGLILY 111

Query: 363 DERGNRLSAYPVRTPRS 313
           DERGNR+  YP ++PR+
Sbjct: 112 DERGNRVPEYPAKSPRA 128