BLASTX nr result

ID: Coptis21_contig00038558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038558
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25025.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002269556.1| PREDICTED: high affinity cationic amino acid...   111   5e-23
ref|XP_002316491.1| cationic amino acid transporter [Populus tri...   106   2e-21
gb|ABA96501.1| Amino acid permease family protein, expressed [Or...   105   3e-21
gb|EEC68890.1| hypothetical protein OsI_37534 [Oryza sativa Indi...   105   3e-21

>emb|CBI25025.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/90 (62%), Positives = 63/90 (70%)
 Frame = +1

Query: 1   KTLRWFDXXXXXXXXXXXXXXFVTSGRASRLYSGPAVILSYAISGLCALLSAFCYTEFAV 180
           + LRWFD              FVT+GRASRLY+GPAV+LSYAI+G+CALLSAFCYTEFAV
Sbjct: 3   RNLRWFDLVGFGLGGMVGAGVFVTTGRASRLYAGPAVVLSYAIAGICALLSAFCYTEFAV 62

Query: 181 DMPVAGGAFSYLRVXXXXXXXXXXXXNLVI 270
           DMPVAGGAFSYLRV            NLV+
Sbjct: 63  DMPVAGGAFSYLRVTFGEFAAFLTGANLVM 92


>ref|XP_002269556.1| PREDICTED: high affinity cationic amino acid transporter 1 [Vitis
           vinifera]
          Length = 586

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/90 (62%), Positives = 63/90 (70%)
 Frame = +1

Query: 1   KTLRWFDXXXXXXXXXXXXXXFVTSGRASRLYSGPAVILSYAISGLCALLSAFCYTEFAV 180
           + LRWFD              FVT+GRASRLY+GPAV+LSYAI+G+CALLSAFCYTEFAV
Sbjct: 53  RNLRWFDLVGFGLGGMVGAGVFVTTGRASRLYAGPAVVLSYAIAGICALLSAFCYTEFAV 112

Query: 181 DMPVAGGAFSYLRVXXXXXXXXXXXXNLVI 270
           DMPVAGGAFSYLRV            NLV+
Sbjct: 113 DMPVAGGAFSYLRVTFGEFAAFLTGANLVM 142


>ref|XP_002316491.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222865531|gb|EEF02662.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 600

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/90 (58%), Positives = 63/90 (70%)
 Frame = +1

Query: 1   KTLRWFDXXXXXXXXXXXXXXFVTSGRASRLYSGPAVILSYAISGLCALLSAFCYTEFAV 180
           +TLRW+D              FVT+GRASR+ +GP+VI+SYAI+GLCALLSAFCYTEFAV
Sbjct: 53  RTLRWYDLVGFGIGGMVGAGVFVTTGRASRVCTGPSVIISYAIAGLCALLSAFCYTEFAV 112

Query: 181 DMPVAGGAFSYLRVXXXXXXXXXXXXNLVI 270
           DMPVAGGAFSYLRV            NL++
Sbjct: 113 DMPVAGGAFSYLRVTFGEFAAFLTGANLIM 142


>gb|ABA96501.1| Amino acid permease family protein, expressed [Oryza sativa
           Japonica Group]
          Length = 535

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/90 (58%), Positives = 62/90 (68%)
 Frame = +1

Query: 1   KTLRWFDXXXXXXXXXXXXXXFVTSGRASRLYSGPAVILSYAISGLCALLSAFCYTEFAV 180
           + LRW D              FVT+GRA+RLY+GPAV++SYAI+GLCALLSAFCYTEFAV
Sbjct: 3   RALRWPDLVGLGLGGMVGAGVFVTTGRATRLYAGPAVVVSYAIAGLCALLSAFCYTEFAV 62

Query: 181 DMPVAGGAFSYLRVXXXXXXXXXXXXNLVI 270
           DMPVAGGAFSYLRV            NL++
Sbjct: 63  DMPVAGGAFSYLRVTFGELAAFLTGANLIM 92


>gb|EEC68890.1| hypothetical protein OsI_37534 [Oryza sativa Indica Group]
          Length = 600

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/90 (58%), Positives = 62/90 (68%)
 Frame = +1

Query: 1   KTLRWFDXXXXXXXXXXXXXXFVTSGRASRLYSGPAVILSYAISGLCALLSAFCYTEFAV 180
           + LRW D              FVT+GRA+RLY+GPAV++SYAI+GLCALLSAFCYTEFAV
Sbjct: 68  RALRWPDLVGLGLGGMVGAGVFVTTGRATRLYAGPAVVVSYAIAGLCALLSAFCYTEFAV 127

Query: 181 DMPVAGGAFSYLRVXXXXXXXXXXXXNLVI 270
           DMPVAGGAFSYLRV            NL++
Sbjct: 128 DMPVAGGAFSYLRVTFGELAAFLTGANLIM 157


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