BLASTX nr result

ID: Coptis21_contig00038554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038554
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC76472.1| hypothetical protein OsI_14206 [Oryza sativa Indi...    64   3e-18
gb|EEE60251.1| hypothetical protein OsJ_13260 [Oryza sativa Japo...    64   3e-18
gb|AAR88574.1| putative transposon protein [Oryza sativa Japonic...    64   3e-18
gb|EEC77846.1| hypothetical protein OsI_17088 [Oryza sativa Indi...    58   4e-17
gb|AAP53948.1| transposon protein, putative, Mutator sub-class [...    60   5e-17

>gb|EEC76472.1| hypothetical protein OsI_14206 [Oryza sativa Indica Group]
          Length = 1029

 Score = 63.9 bits (154), Expect(2) = 3e-18
 Identities = 30/46 (65%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   FFSFKSSCDSVENNISESFNSTIVDARFKPIIGMLEEIRMDAMKRI 140
           +F   S+CDSVENNI ESFN+ I++ARFKPII MLE+IRM   +RI
Sbjct: 586 WFKLGSNCDSVENNICESFNNWIIEARFKPIITMLEDIRMKVTRRI 631



 Score = 52.4 bits (124), Expect(2) = 3e-18
 Identities = 25/69 (36%), Positives = 36/69 (52%)
 Frame = +1

Query: 142 MQNRREIMASWTDEICPIIREKLEKSKDDHRFWSPFHTGQQKFEVKYKEKGYVVDLHKRT 321
           +Q  +     WT  ICP I +K+ K +   +F      G   FEV+ K+  + VDL   T
Sbjct: 631 IQENKTNSERWTMGICPNILKKINKIRHATQFCHVLWNGSSGFEVREKKWRFTVDLSANT 690

Query: 322 CSCRMWELS 348
           CSCR W++S
Sbjct: 691 CSCRYWQIS 699


>gb|EEE60251.1| hypothetical protein OsJ_13260 [Oryza sativa Japonica Group]
          Length = 974

 Score = 63.9 bits (154), Expect(2) = 3e-18
 Identities = 30/46 (65%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   FFSFKSSCDSVENNISESFNSTIVDARFKPIIGMLEEIRMDAMKRI 140
           +F   S+CDSVENNI ESFN+ I++ARFKPII MLE+IRM   +RI
Sbjct: 531 WFKLGSNCDSVENNICESFNNWIIEARFKPIITMLEDIRMKVTRRI 576



 Score = 52.4 bits (124), Expect(2) = 3e-18
 Identities = 25/69 (36%), Positives = 36/69 (52%)
 Frame = +1

Query: 142 MQNRREIMASWTDEICPIIREKLEKSKDDHRFWSPFHTGQQKFEVKYKEKGYVVDLHKRT 321
           +Q  +     WT  ICP I +K+ K +   +F      G   FEV+ K+  + VDL   T
Sbjct: 576 IQENKTNSERWTMGICPNILKKINKIRHATQFCHVLWNGSSGFEVREKKWRFTVDLSANT 635

Query: 322 CSCRMWELS 348
           CSCR W++S
Sbjct: 636 CSCRYWQIS 644


>gb|AAR88574.1| putative transposon protein [Oryza sativa Japonica Group]
           gi|108711944|gb|ABF99739.1| transposon protein,
           putative, Mutator sub-class [Oryza sativa Japonica
           Group]
          Length = 839

 Score = 63.9 bits (154), Expect(2) = 3e-18
 Identities = 30/46 (65%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   FFSFKSSCDSVENNISESFNSTIVDARFKPIIGMLEEIRMDAMKRI 140
           +F   S+CDSVENNI ESFN+ I++ARFKPII MLE+IRM   +RI
Sbjct: 518 WFKLGSNCDSVENNICESFNNWIIEARFKPIITMLEDIRMKVTRRI 563



 Score = 52.4 bits (124), Expect(2) = 3e-18
 Identities = 25/69 (36%), Positives = 36/69 (52%)
 Frame = +1

Query: 142 MQNRREIMASWTDEICPIIREKLEKSKDDHRFWSPFHTGQQKFEVKYKEKGYVVDLHKRT 321
           +Q  +     WT  ICP I +K+ K +   +F      G   FEV+ K+  + VDL   T
Sbjct: 563 IQENKTNSERWTMGICPNILKKINKIRHATQFCHVLWNGSSGFEVREKKWRFTVDLSANT 622

Query: 322 CSCRMWELS 348
           CSCR W++S
Sbjct: 623 CSCRYWQIS 631


>gb|EEC77846.1| hypothetical protein OsI_17088 [Oryza sativa Indica Group]
          Length = 690

 Score = 58.2 bits (139), Expect(2) = 4e-17
 Identities = 26/69 (37%), Positives = 38/69 (55%)
 Frame = +1

Query: 142 MQNRREIMASWTDEICPIIREKLEKSKDDHRFWSPFHTGQQKFEVKYKEKGYVVDLHKRT 321
           +Q  R+  A W   ICP I ++L+    +  F  P + G   FEVK +   + V+L  +T
Sbjct: 358 IQENRDKAAKWNTLICPNIYKRLKSYITESAFCHPIYNGDDSFEVKTQTSRFTVNLSTKT 417

Query: 322 CSCRMWELS 348
           CSCR W+LS
Sbjct: 418 CSCRYWQLS 426



 Score = 54.7 bits (130), Expect(2) = 4e-17
 Identities = 27/46 (58%), Positives = 31/46 (67%)
 Frame = +3

Query: 3   FFSFKSSCDSVENNISESFNSTIVDARFKPIIGMLEEIRMDAMKRI 140
           +F   S CDSV+NN+ ESFN  IV AR+ PII MLE IR   M RI
Sbjct: 313 WFKIGSDCDSVDNNMCESFNKWIVQARYLPIISMLEAIRCKVMVRI 358


>gb|AAP53948.1| transposon protein, putative, Mutator sub-class [Oryza sativa
           Japonica Group]
          Length = 1005

 Score = 60.5 bits (145), Expect(2) = 5e-17
 Identities = 27/46 (58%), Positives = 38/46 (82%)
 Frame = +3

Query: 3   FFSFKSSCDSVENNISESFNSTIVDARFKPIIGMLEEIRMDAMKRI 140
           +F   S+C+SV+NN+SESFNS I+++RFKPII MLE+IR+   +RI
Sbjct: 633 WFRLGSNCESVDNNMSESFNSWIIESRFKPIITMLEDIRIQVTRRI 678



 Score = 52.0 bits (123), Expect(2) = 5e-17
 Identities = 25/69 (36%), Positives = 35/69 (50%)
 Frame = +1

Query: 142 MQNRREIMASWTDEICPIIREKLEKSKDDHRFWSPFHTGQQKFEVKYKEKGYVVDLHKRT 321
           +Q  R     WT  +CP I  K  K +   +F      G   FEV+ K+  + VDL  +T
Sbjct: 678 IQENRSNSERWTMTVCPNIIRKFNKIRHRTQFCHVLWNGDAGFEVRDKKWRFTVDLTSKT 737

Query: 322 CSCRMWELS 348
           CSCR W++S
Sbjct: 738 CSCRYWQVS 746


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