BLASTX nr result

ID: Coptis21_contig00038540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038540
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44646.1| unknown [Medicago truncatula]                           75   6e-12
ref|XP_003554440.1| PREDICTED: F-box/kelch-repeat protein At1g57...    75   6e-12
ref|XP_003542610.1| PREDICTED: F-box/kelch-repeat protein At1g57...    75   6e-12
ref|NP_001241212.1| uncharacterized protein LOC100809651 [Glycin...    75   6e-12
gb|ACJ85554.1| unknown [Medicago truncatula]                           75   6e-12

>gb|AFK44646.1| unknown [Medicago truncatula]
          Length = 376

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
 Frame = -3

Query: 396 PLDILLSITMKLPLPGDYINSRLVCKTWASSLPPTIRWTVNPICSATQCPWLMFSNRGSR 217
           P ++L  I  +L L  D + +  VCK+W         +  N +    Q PWLM+  +  +
Sbjct: 40  PAELLEMIISRLALE-DNVRASAVCKSW--------NFVANAVRMVNQSPWLMYFPKFGQ 90

Query: 216 TCSFVDLTSNATHSFDMPELLGAKICFSSDGWLLMSKGEYS-MFFFNPFTTVTIEKEHRI 40
              F D     T+S + PEL G+++C++ DGWLL+ +     +FFFNPFT  TI+     
Sbjct: 91  WYEFYDPVQRKTYSIEFPELNGSRVCYTKDGWLLLYRPRTDRVFFFNPFTRETIKMPRFE 150

Query: 39  LTF 31
           +T+
Sbjct: 151 MTY 153


>ref|XP_003554440.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Glycine max]
          Length = 376

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
 Frame = -3

Query: 396 PLDILLSITMKLPLPGDYINSRLVCKTWASSLPPTIRWTVNPICSATQCPWLMFSNRGSR 217
           P ++L SI  +L L  D I +  VC+ W S          + +    Q PWLM+  +   
Sbjct: 40  PAELLESILSRLIL-ADNIRASAVCRRWHS--------VASDVRVVNQSPWLMYFPKFGD 90

Query: 216 TCSFVDLTSNATHSFDMPELLGAKICFSSDGWLLMSKGE-YSMFFFNPFTTVTIEKEHRI 40
              F D     TH+F++PEL G+++C++ DGWLL+ +   + +FFFNPFT   I+     
Sbjct: 91  CYEFYDPVQRKTHTFELPELNGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIKLPRFE 150

Query: 39  LTF 31
           +T+
Sbjct: 151 MTY 153


>ref|XP_003542610.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Glycine max]
          Length = 376

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
 Frame = -3

Query: 396 PLDILLSITMKLPLPGDYINSRLVCKTWASSLPPTIRWTVNPICSATQCPWLMFSNRGSR 217
           P ++L  I  +L L  D + + +VCK W S            +C   Q PWLM+  +   
Sbjct: 40  PTELLELILSRLSLD-DNVRASVVCKRWHS--------VATSVCVVNQSPWLMYFPKFGD 90

Query: 216 TCSFVDLTSNATHSFDMPELLGAKICFSSDGWLLMSKGE-YSMFFFNPFTTVTI-----E 55
              F D     T+S ++PEL G+++C++ DGWLL+ +   + +FFFNPFT   I     E
Sbjct: 91  WYEFYDPVHRKTYSIELPELSGSRVCYTKDGWLLLYRPRTHRVFFFNPFTQEIIKLPRFE 150

Query: 54  KEHRILTF 31
             ++I+ F
Sbjct: 151 MSYQIVAF 158


>ref|NP_001241212.1| uncharacterized protein LOC100809651 [Glycine max]
           gi|255641457|gb|ACU21004.1| unknown [Glycine max]
          Length = 376

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
 Frame = -3

Query: 396 PLDILLSITMKLPLPGDYINSRLVCKTWASSLPPTIRWTVNPICSATQCPWLMFSNRGSR 217
           P ++L  I  +L L  D + + +VCK W S            +C   Q PWLM+  +   
Sbjct: 40  PTELLELILSRLSLD-DNVRASVVCKRWHS--------VATSVCVVNQSPWLMYFPKFGD 90

Query: 216 TCSFVDLTSNATHSFDMPELLGAKICFSSDGWLLMSKGE-YSMFFFNPFTTVTI-----E 55
              F D     T+S ++PEL G+++C++ DGWLL+ +   + +FFFNPFT   I     E
Sbjct: 91  WYEFYDPAHRKTYSIELPELRGSRVCYTKDGWLLLYRPRTHRVFFFNPFTMEIIKLPRFE 150

Query: 54  KEHRILTF 31
             ++I+ F
Sbjct: 151 MSYQIVAF 158


>gb|ACJ85554.1| unknown [Medicago truncatula]
          Length = 220

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
 Frame = -3

Query: 396 PLDILLSITMKLPLPGDYINSRLVCKTWASSLPPTIRWTVNPICSATQCPWLMFSNRGSR 217
           P ++L  I  +L L  D + +  VCK+W         +  N +    Q PWLM+  +  +
Sbjct: 40  PAELLEMIISRLALE-DNVRASAVCKSW--------NFVANAVRMVNQSPWLMYFPKFGQ 90

Query: 216 TCSFVDLTSNATHSFDMPELLGAKICFSSDGWLLMSKGEYS-MFFFNPFTTVTIEKEHRI 40
              F D     T+S + PEL G+++C++ DGWLL+ +     +FFFNPFT  TI+     
Sbjct: 91  WYEFYDPVQRKTYSIEFPELNGSRVCYTKDGWLLLYRPRTDRVFFFNPFTRETIKMPRFE 150

Query: 39  LTF 31
           +T+
Sbjct: 151 MTY 153