BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038513
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   172   2e-41
ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ...   157   6e-37
ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containi...   157   6e-37
emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]   157   6e-37

>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Vitis vinifera]
           gi|302143555|emb|CBI22116.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score =  172 bits (437), Expect = 2e-41
 Identities = 81/117 (69%), Positives = 98/117 (83%)
 Frame = -2

Query: 356 IKHYGCMVDVLGRAGLLEEAEALITNMSIKPDVIIWGSLLSACRDHGNVAMSERAAKRLV 177
           IKHY CMVD LGRAGLLEEAE LI NM + PD IIW SLLSACR HGNV +++RAAK +V
Sbjct: 394 IKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHGNVELAKRAAKHIV 453

Query: 176 ELDPSDSGSYILLSNVYASSGRYEEAMDARRSMQERGTKKEPGCSLIEVNGEVHEFV 6
           +LD +DS  Y+LLSN+YA+S ++EEAM+ R SM+E+  +KEPGCSLIEVNGE+HEFV
Sbjct: 454 DLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCSLIEVNGEIHEFV 510


>ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|222856190|gb|EEE93737.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  170 bits (431), Expect = 1e-40
 Identities = 80/117 (68%), Positives = 100/117 (85%)
 Frame = -2

Query: 356 IKHYGCMVDVLGRAGLLEEAEALITNMSIKPDVIIWGSLLSACRDHGNVAMSERAAKRLV 177
           IKHY CMVDVLGRAGLLEEAE LI +M + PD IIWGSLLS+CR++GN+ M+++AAKR+ 
Sbjct: 366 IKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQAAKRVN 425

Query: 176 ELDPSDSGSYILLSNVYASSGRYEEAMDARRSMQERGTKKEPGCSLIEVNGEVHEFV 6
           ELDP++S S+ILLSNVYA+   +EEA++ R S++E+   KEPGCSLIEVNGEVHEFV
Sbjct: 426 ELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNGEVHEFV 482


>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518779|gb|AET00403.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  157 bits (398), Expect = 6e-37
 Identities = 74/117 (63%), Positives = 96/117 (82%)
 Frame = -2

Query: 356 IKHYGCMVDVLGRAGLLEEAEALITNMSIKPDVIIWGSLLSACRDHGNVAMSERAAKRLV 177
           IKHY C+VDVLG+AGLLEEAE LI  M +KPD IIWGSLLS+CR H NV ++ RAA+R+ 
Sbjct: 401 IKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIARRAAQRVY 460

Query: 176 ELDPSDSGSYILLSNVYASSGRYEEAMDARRSMQERGTKKEPGCSLIEVNGEVHEFV 6
           EL+PSD+  Y+L+SNV+A+S ++EEA++ R  M+E  T+KEPGCS IE+ GEVHEF+
Sbjct: 461 ELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGEVHEFI 517


>ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
           gi|297742795|emb|CBI35475.3| unnamed protein product
           [Vitis vinifera]
          Length = 517

 Score =  157 bits (398), Expect = 6e-37
 Identities = 72/117 (61%), Positives = 95/117 (81%)
 Frame = -2

Query: 356 IKHYGCMVDVLGRAGLLEEAEALITNMSIKPDVIIWGSLLSACRDHGNVAMSERAAKRLV 177
           I+HYGCMVD+LGRAGLL EA+ LI +M IKPD +IW SLLSAC  HGN+A++E A K ++
Sbjct: 373 IQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMII 432

Query: 176 ELDPSDSGSYILLSNVYASSGRYEEAMDARRSMQERGTKKEPGCSLIEVNGEVHEFV 6
           EL+P D G YILL N+Y S+ R+E+A+ AR++M++R  KK+PGCS +EVNG VHEF+
Sbjct: 433 ELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFL 489


>emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
          Length = 768

 Score =  157 bits (398), Expect = 6e-37
 Identities = 72/117 (61%), Positives = 95/117 (81%)
 Frame = -2

Query: 356 IKHYGCMVDVLGRAGLLEEAEALITNMSIKPDVIIWGSLLSACRDHGNVAMSERAAKRLV 177
           I+HYGCMVD+LGRAGLL EA+ LI +M IKPD +IW SLLSAC  HGN+A++E A K ++
Sbjct: 624 IQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMII 683

Query: 176 ELDPSDSGSYILLSNVYASSGRYEEAMDARRSMQERGTKKEPGCSLIEVNGEVHEFV 6
           EL+P D G YILL N+Y S+ R+E+A+ AR++M++R  KK+PGCS +EVNG VHEF+
Sbjct: 684 ELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFL 740