BLASTX nr result

ID: Coptis21_contig00038477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038477
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like...   132   2e-29
emb|CBI25718.3| unnamed protein product [Vitis vinifera]              132   2e-29
gb|AFI25186.1| putative beta-D-xylosidase [Nicotiana tabacum]         129   2e-28
ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|3...   125   3e-27

>ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like [Vitis vinifera]
          Length = 789

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/83 (73%), Positives = 71/83 (85%)
 Frame = -3

Query: 250 ITAHPHPEYPCKPPHHNNYTFCNTSLPISTRAQSIISLLTLPEKITQLSNNASPIARLGI 71
           I+   HP++PC PP +++Y FCNTSLPISTRAQS++SLLTL EKI QLS+ A+ I RL I
Sbjct: 22  ISESTHPQFPCMPPTNSDYPFCNTSLPISTRAQSLVSLLTLSEKIQQLSDEAAAIPRLYI 81

Query: 70  PAYEWWSESLHGIATNGPGVSFN 2
           PAYEWWSESLHGIATNGPGVSFN
Sbjct: 82  PAYEWWSESLHGIATNGPGVSFN 104


>emb|CBI25718.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/83 (73%), Positives = 71/83 (85%)
 Frame = -3

Query: 250 ITAHPHPEYPCKPPHHNNYTFCNTSLPISTRAQSIISLLTLPEKITQLSNNASPIARLGI 71
           I+   HP++PC PP +++Y FCNTSLPISTRAQS++SLLTL EKI QLS+ A+ I RL I
Sbjct: 22  ISESTHPQFPCMPPTNSDYPFCNTSLPISTRAQSLVSLLTLSEKIQQLSDEAAAIPRLYI 81

Query: 70  PAYEWWSESLHGIATNGPGVSFN 2
           PAYEWWSESLHGIATNGPGVSFN
Sbjct: 82  PAYEWWSESLHGIATNGPGVSFN 104


>gb|AFI25186.1| putative beta-D-xylosidase [Nicotiana tabacum]
          Length = 791

 Score =  129 bits (324), Expect = 2e-28
 Identities = 57/81 (70%), Positives = 69/81 (85%)
 Frame = -3

Query: 244 AHPHPEYPCKPPHHNNYTFCNTSLPISTRAQSIISLLTLPEKITQLSNNASPIARLGIPA 65
           ++P P++PC+PPHH  YTFCN +LPISTR QS+ISLLT+ EKI  LS+N + I RLG+PA
Sbjct: 26  SNPQPQFPCQPPHHK-YTFCNKNLPISTRVQSLISLLTIDEKILHLSDNTTSIPRLGLPA 84

Query: 64  YEWWSESLHGIATNGPGVSFN 2
           YEWWSESLHGIATNGP V+FN
Sbjct: 85  YEWWSESLHGIATNGPAVNFN 105


>ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|222846715|gb|EEE84262.1|
           predicted protein [Populus trichocarpa]
          Length = 780

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/77 (75%), Positives = 66/77 (85%)
 Frame = -3

Query: 235 HPEYPCKPPHHNNYTFCNTSLPISTRAQSIISLLTLPEKITQLSNNASPIARLGIPAYEW 56
           +P++PCKPP HN Y+FCN SLPI+ RAQS+IS LTL EKI QLS+NAS I RLGIP YEW
Sbjct: 27  NPQFPCKPPTHNTYSFCNKSLPITRRAQSLISHLTLQEKIQQLSDNASGIPRLGIPHYEW 86

Query: 55  WSESLHGIATNGPGVSF 5
           WSESLHGI+ NGPGVSF
Sbjct: 87  WSESLHGISINGPGVSF 103


>ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|355514279|gb|AES95902.1|
           Beta-D-xylosidase [Medicago truncatula]
          Length = 783

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/77 (74%), Positives = 67/77 (87%)
 Frame = -3

Query: 232 PEYPCKPPHHNNYTFCNTSLPISTRAQSIISLLTLPEKITQLSNNASPIARLGIPAYEWW 53
           P+YPCKPPH ++Y FCN SLPISTR  S+ISLLTL +KI QLSN AS I+ LGIP+Y+WW
Sbjct: 29  PDYPCKPPH-SHYPFCNISLPISTRTTSLISLLTLSDKINQLSNTASSISHLGIPSYQWW 87

Query: 52  SESLHGIATNGPGVSFN 2
           SE+LHGIATNGPGV+FN
Sbjct: 88  SEALHGIATNGPGVNFN 104


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