BLASTX nr result

ID: Coptis21_contig00038399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038399
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55551.1| mutator-like transposase [Rosa rugosa]                  59   5e-07
ref|XP_002325188.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
gb|ABI34394.1| Mutator transposable element-related protein, put...    56   3e-06
dbj|BAB09619.1| mutator-like transposase-like protein [Arabidops...    56   3e-06
ref|XP_002325911.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>gb|AFP55551.1| mutator-like transposase [Rosa rugosa]
          Length = 721

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/73 (35%), Positives = 40/73 (54%)
 Frame = -1

Query: 280 DEHVFQVVTEKHEYWVDLLSRYYTCNNWGIDGFPCRHAIASIYCKGDSVYLYIEVAFLAT 101
           D +V++V  +K+   V+L SR+ +C  W + GFPC HA+  I   G S YLY+   +   
Sbjct: 585 DTYVYEVHCQKYNSMVNLESRFCSCGEWQLYGFPCSHALVVIQQHGSSPYLYVNELYKVD 644

Query: 100 SFSNTYSHGITAI 62
            +  TYS  I  +
Sbjct: 645 KYRETYSFPINPL 657


>ref|XP_002325188.1| predicted protein [Populus trichocarpa] gi|222866622|gb|EEF03753.1|
           predicted protein [Populus trichocarpa]
          Length = 1041

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 31/58 (53%)
 Frame = -1

Query: 235 VDLLSRYYTCNNWGIDGFPCRHAIASIYCKGDSVYLYIEVAFLATSFSNTYSHGITAI 62
           VD   R  TC  W + G PCRHAIA   CKG SVY Y    +   SF +TYS  I  I
Sbjct: 804 VDTEKRECTCLEWKLAGLPCRHAIAVFKCKGSSVYDYCSKYYTVDSFRSTYSKSILPI 861


>gb|ABI34394.1| Mutator transposable element-related protein, putative [Solanum
           tuberosum]
          Length = 616

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
 Frame = -1

Query: 247 HEYW-VDLLSRYYTCNNWGIDGFPCRHAIASIYCKGDSVYLYIEVAFLATSFSNTYSHGI 71
           H+ W VDL +R  +C  W I G PC+HAIA+I  K D++  Y++  +   ++   Y H I
Sbjct: 216 HDSWAVDLENRICSCTKWSIMGIPCKHAIAAIRAKKDNILDYVDDCYKVETYRRIYEHAI 275

Query: 70  TAIS 59
            +I+
Sbjct: 276 LSIN 279


>dbj|BAB09619.1| mutator-like transposase-like protein [Arabidopsis thaliana]
           gi|16648945|gb|AAL24324.1| mutator-like transposase-like
           protein [Arabidopsis thaliana]
           gi|20259876|gb|AAM13285.1| mutator-like transposase-like
           protein [Arabidopsis thaliana]
          Length = 597

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/80 (36%), Positives = 45/80 (56%)
 Frame = -1

Query: 280 DEHVFQVVTEKHEYWVDLLSRYYTCNNWGIDGFPCRHAIASIYCKGDSVYLYIEVAFLAT 101
           +E  F++V+ +    VD+ +R  +C  W I G PC HA A++   G +V+L+ E  F  +
Sbjct: 455 NEVEFEIVSTERTNIVDIRTRDCSCRRWQIYGLPCAHAAAALISCGRNVHLFAEPCFTVS 514

Query: 100 SFSNTYSHGITAISRMRSVW 41
           S+  TYS  I  I   RS+W
Sbjct: 515 SYQQTYSQMIGEIPD-RSLW 533


>ref|XP_002325911.1| predicted protein [Populus trichocarpa] gi|222862786|gb|EEF00293.1|
           predicted protein [Populus trichocarpa]
          Length = 594

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/80 (33%), Positives = 43/80 (53%)
 Frame = -1

Query: 280 DEHVFQVVTEKHEYWVDLLSRYYTCNNWGIDGFPCRHAIASIYCKGDSVYLYIEVAFLAT 101
           +E  F++V+ +    VD+ SR  +C  W + G PC HA A++   G + +L+ E  F   
Sbjct: 450 NEVEFEIVSTERTNIVDIRSRVCSCRRWQLYGLPCAHAAAALISCGQNAHLFAEPCFTVA 509

Query: 100 SFSNTYSHGITAISRMRSVW 41
           S+  TYS  I  I   +S+W
Sbjct: 510 SYRETYSEMINPIPD-KSLW 528


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