BLASTX nr result

ID: Coptis21_contig00038208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038208
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510588.1| Alpha-expansin 11 precursor, putative [Ricin...    66   3e-09
gb|AET25522.1| expansin [Chimonanthus praecox]                         65   6e-09
ref|XP_002300688.1| hypothetical protein POPTRDRAFT_709919 [Popu...    60   2e-07
gb|ACK36944.1| expansin [Annona cherimola]                             60   2e-07
ref|XP_003544384.1| PREDICTED: expansin-A11-like, partial [Glyci...    59   4e-07

>ref|XP_002510588.1| Alpha-expansin 11 precursor, putative [Ricinus communis]
           gi|223551289|gb|EEF52775.1| Alpha-expansin 11 precursor,
           putative [Ricinus communis]
          Length = 256

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = +1

Query: 1   SLSFKVITTDGETRFFPNIVPSGWQFGQTFSSQVQF 108
           SLSFK+ TTDG TRFFPN+VPS W FGQTFSS VQF
Sbjct: 221 SLSFKITTTDGATRFFPNVVPSNWAFGQTFSSSVQF 256


>gb|AET25522.1| expansin [Chimonanthus praecox]
          Length = 256

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = +1

Query: 1   SLSFKVITTDGETRFFPNIVPSGWQFGQTFSSQVQF 108
           SLSFK+ TTDGETR FP+IVPS W FGQTFSS VQF
Sbjct: 221 SLSFKITTTDGETRLFPDIVPSSWHFGQTFSSSVQF 256


>ref|XP_002300688.1| hypothetical protein POPTRDRAFT_709919 [Populus trichocarpa]
           gi|222842414|gb|EEE79961.1| hypothetical protein
           POPTRDRAFT_709919 [Populus trichocarpa]
          Length = 256

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +1

Query: 1   SLSFKVITTDGETRFFPNIVPSGWQFGQTFSSQVQF 108
           SLSFKV TTDG+TRFF +IVP+ W FGQTF S VQF
Sbjct: 221 SLSFKVTTTDGQTRFFTDIVPANWGFGQTFQSSVQF 256


>gb|ACK36944.1| expansin [Annona cherimola]
          Length = 256

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +1

Query: 1   SLSFKVITTDGETRFFPNIVPSGWQFGQTFSSQVQF 108
           SLSFK  T DGETR FP+IVPS W+FGQ+FSS VQF
Sbjct: 221 SLSFKATTGDGETRIFPDIVPSSWKFGQSFSSTVQF 256


>ref|XP_003544384.1| PREDICTED: expansin-A11-like, partial [Glycine max]
          Length = 178

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +1

Query: 1   SLSFKVITTDGETRFFPNIVPSGWQFGQTFSSQVQF 108
           SLSF+V TTDGETR F +IVP+ W FGQTFSS VQF
Sbjct: 143 SLSFRVTTTDGETRVFQDIVPASWTFGQTFSSPVQF 178


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