BLASTX nr result
ID: Coptis21_contig00038141
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038141 (371 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003527463.1| PREDICTED: uncharacterized protein LOC100777... 55 1e-06 gb|ABK96324.1| unknown [Populus trichocarpa x Populus deltoides] 54 1e-06 ref|XP_002275464.1| PREDICTED: uncharacterized protein LOC100252... 54 2e-06 ref|XP_002275421.1| PREDICTED: uncharacterized protein LOC100257... 53 3e-06 ref|XP_002275321.1| PREDICTED: uncharacterized protein LOC100263... 53 3e-06 >ref|XP_003527463.1| PREDICTED: uncharacterized protein LOC100777298 [Glycine max] Length = 86 Score = 54.7 bits (130), Expect(2) = 1e-06 Identities = 27/48 (56%), Positives = 34/48 (70%) Frame = +1 Query: 82 MSSVSKVWIVATSIGVDGITLKDQGFYRWNYAIPSVHQAVEKNLGSIS 225 MSS K WIVATS+GV LKDQG RWNYA+ S + V+ ++GS+S Sbjct: 1 MSSAQKAWIVATSVGVVE-ALKDQGICRWNYALRSAQKQVKSHVGSLS 47 Score = 22.7 bits (47), Expect(2) = 1e-06 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +3 Query: 288 KQPEESFRIVMFLS 329 KQ EES R VM+LS Sbjct: 68 KQSEESLRTVMYLS 81 >gb|ABK96324.1| unknown [Populus trichocarpa x Populus deltoides] Length = 88 Score = 53.9 bits (128), Expect(2) = 1e-06 Identities = 26/49 (53%), Positives = 35/49 (71%), Gaps = 1/49 (2%) Frame = +1 Query: 82 MSSVSKVWIVATSIGVDGI-TLKDQGFYRWNYAIPSVHQAVEKNLGSIS 225 MSS SK W+VA ++G G+ LKDQGF RWNY + S+HQ + ++GS S Sbjct: 1 MSSASKAWLVAAAVG--GVEALKDQGFCRWNYTLRSLHQHAKNHVGSAS 47 Score = 23.5 bits (49), Expect(2) = 1e-06 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +3 Query: 282 RLKQPEESFRIVMFLS 329 R KQ EES R VM+LS Sbjct: 68 RAKQSEESLRKVMYLS 83 >ref|XP_002275464.1| PREDICTED: uncharacterized protein LOC100252779 [Vitis vinifera] Length = 88 Score = 53.5 bits (127), Expect(2) = 2e-06 Identities = 26/48 (54%), Positives = 31/48 (64%) Frame = +1 Query: 82 MSSVSKVWIVATSIGVDGITLKDQGFYRWNYAIPSVHQAVEKNLGSIS 225 MS + K WIVA S+G LKDQGF RWNY + S+HQ + NL S S Sbjct: 1 MSHMGKAWIVAASVGAVE-ALKDQGFCRWNYTLRSIHQHAKNNLRSFS 47 Score = 23.1 bits (48), Expect(2) = 2e-06 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +3 Query: 282 RLKQPEESFRIVMFLS 329 + KQ EES R VM+LS Sbjct: 68 KAKQSEESLRTVMYLS 83 >ref|XP_002275421.1| PREDICTED: uncharacterized protein LOC100257932 [Vitis vinifera] Length = 88 Score = 52.8 bits (125), Expect(2) = 3e-06 Identities = 26/48 (54%), Positives = 31/48 (64%) Frame = +1 Query: 82 MSSVSKVWIVATSIGVDGITLKDQGFYRWNYAIPSVHQAVEKNLGSIS 225 MS + K WIVA S+G LKDQGF RWNY + S+HQ + NL S S Sbjct: 1 MSHMRKAWIVAASVGAVE-ALKDQGFCRWNYTMRSIHQHAKNNLRSFS 47 Score = 23.1 bits (48), Expect(2) = 3e-06 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +3 Query: 282 RLKQPEESFRIVMFLS 329 + KQ EES R VM+LS Sbjct: 68 KAKQSEESLRTVMYLS 83 >ref|XP_002275321.1| PREDICTED: uncharacterized protein LOC100263064 [Vitis vinifera] Length = 88 Score = 52.8 bits (125), Expect(2) = 3e-06 Identities = 25/48 (52%), Positives = 31/48 (64%) Frame = +1 Query: 82 MSSVSKVWIVATSIGVDGITLKDQGFYRWNYAIPSVHQAVEKNLGSIS 225 MS + K W+VA S+G LKDQGF RWNY + S+HQ + NL S S Sbjct: 1 MSHMRKAWVVAASVGAVE-ALKDQGFCRWNYTLRSIHQHAKNNLRSFS 47 Score = 23.1 bits (48), Expect(2) = 3e-06 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +3 Query: 282 RLKQPEESFRIVMFLS 329 + KQ EES R VM+LS Sbjct: 68 KAKQSEESLRTVMYLS 83