BLASTX nr result

ID: Coptis21_contig00038141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038141
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527463.1| PREDICTED: uncharacterized protein LOC100777...    55   1e-06
gb|ABK96324.1| unknown [Populus trichocarpa x Populus deltoides]       54   1e-06
ref|XP_002275464.1| PREDICTED: uncharacterized protein LOC100252...    54   2e-06
ref|XP_002275421.1| PREDICTED: uncharacterized protein LOC100257...    53   3e-06
ref|XP_002275321.1| PREDICTED: uncharacterized protein LOC100263...    53   3e-06

>ref|XP_003527463.1| PREDICTED: uncharacterized protein LOC100777298 [Glycine max]
          Length = 86

 Score = 54.7 bits (130), Expect(2) = 1e-06
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = +1

Query: 82  MSSVSKVWIVATSIGVDGITLKDQGFYRWNYAIPSVHQAVEKNLGSIS 225
           MSS  K WIVATS+GV    LKDQG  RWNYA+ S  + V+ ++GS+S
Sbjct: 1   MSSAQKAWIVATSVGVVE-ALKDQGICRWNYALRSAQKQVKSHVGSLS 47



 Score = 22.7 bits (47), Expect(2) = 1e-06
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3

Query: 288 KQPEESFRIVMFLS 329
           KQ EES R VM+LS
Sbjct: 68  KQSEESLRTVMYLS 81


>gb|ABK96324.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 88

 Score = 53.9 bits (128), Expect(2) = 1e-06
 Identities = 26/49 (53%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
 Frame = +1

Query: 82  MSSVSKVWIVATSIGVDGI-TLKDQGFYRWNYAIPSVHQAVEKNLGSIS 225
           MSS SK W+VA ++G  G+  LKDQGF RWNY + S+HQ  + ++GS S
Sbjct: 1   MSSASKAWLVAAAVG--GVEALKDQGFCRWNYTLRSLHQHAKNHVGSAS 47



 Score = 23.5 bits (49), Expect(2) = 1e-06
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 282 RLKQPEESFRIVMFLS 329
           R KQ EES R VM+LS
Sbjct: 68  RAKQSEESLRKVMYLS 83


>ref|XP_002275464.1| PREDICTED: uncharacterized protein LOC100252779 [Vitis vinifera]
          Length = 88

 Score = 53.5 bits (127), Expect(2) = 2e-06
 Identities = 26/48 (54%), Positives = 31/48 (64%)
 Frame = +1

Query: 82  MSSVSKVWIVATSIGVDGITLKDQGFYRWNYAIPSVHQAVEKNLGSIS 225
           MS + K WIVA S+G     LKDQGF RWNY + S+HQ  + NL S S
Sbjct: 1   MSHMGKAWIVAASVGAVE-ALKDQGFCRWNYTLRSIHQHAKNNLRSFS 47



 Score = 23.1 bits (48), Expect(2) = 2e-06
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 282 RLKQPEESFRIVMFLS 329
           + KQ EES R VM+LS
Sbjct: 68  KAKQSEESLRTVMYLS 83


>ref|XP_002275421.1| PREDICTED: uncharacterized protein LOC100257932 [Vitis vinifera]
          Length = 88

 Score = 52.8 bits (125), Expect(2) = 3e-06
 Identities = 26/48 (54%), Positives = 31/48 (64%)
 Frame = +1

Query: 82  MSSVSKVWIVATSIGVDGITLKDQGFYRWNYAIPSVHQAVEKNLGSIS 225
           MS + K WIVA S+G     LKDQGF RWNY + S+HQ  + NL S S
Sbjct: 1   MSHMRKAWIVAASVGAVE-ALKDQGFCRWNYTMRSIHQHAKNNLRSFS 47



 Score = 23.1 bits (48), Expect(2) = 3e-06
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 282 RLKQPEESFRIVMFLS 329
           + KQ EES R VM+LS
Sbjct: 68  KAKQSEESLRTVMYLS 83


>ref|XP_002275321.1| PREDICTED: uncharacterized protein LOC100263064 [Vitis vinifera]
          Length = 88

 Score = 52.8 bits (125), Expect(2) = 3e-06
 Identities = 25/48 (52%), Positives = 31/48 (64%)
 Frame = +1

Query: 82  MSSVSKVWIVATSIGVDGITLKDQGFYRWNYAIPSVHQAVEKNLGSIS 225
           MS + K W+VA S+G     LKDQGF RWNY + S+HQ  + NL S S
Sbjct: 1   MSHMRKAWVVAASVGAVE-ALKDQGFCRWNYTLRSIHQHAKNNLRSFS 47



 Score = 23.1 bits (48), Expect(2) = 3e-06
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 282 RLKQPEESFRIVMFLS 329
           + KQ EES R VM+LS
Sbjct: 68  KAKQSEESLRTVMYLS 83


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