BLASTX nr result

ID: Coptis21_contig00038094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038094
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   106   2e-21
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   104   9e-21
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   103   1e-20
gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indi...   103   1e-20
gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japo...   103   1e-20

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/107 (46%), Positives = 69/107 (64%)
 Frame = -3

Query: 324 YKIISKTLANRLKSTIFHSISPYQSAYVTGRQISDNVILAHEIFHTMNNKKGLSGLMAIK 145
           YK+ISK + NRLK T+   I P Q A++  R I DN+++AHE+FH+  NK G  G +AIK
Sbjct: 530 YKVISKIITNRLKITLGKIIHPLQGAFIPERLIQDNILIAHEVFHSFKNKTGRGGWIAIK 589

Query: 144 VDMSKAFDRINWHTIITIMKSVGIDNHICNLVSNCISTPHFSVMVNG 4
           +DM KA+DR+ W  I T M  +G        + +CIS+  FSV+VNG
Sbjct: 590 LDMEKAYDRLEWKYIYTTMDKMGFSPIWIEWIRSCISSASFSVLVNG 636


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  104 bits (259), Expect = 9e-21
 Identities = 46/107 (42%), Positives = 71/107 (66%)
 Frame = -3

Query: 324 YKIISKTLANRLKSTIFHSISPYQSAYVTGRQISDNVILAHEIFHTMNNKKGLSGLMAIK 145
           YKI++K + NRLK  +   ISP Q ++V  RQI+DNVI+  E+FH+M NK+G  G MA+K
Sbjct: 521 YKIVTKVIINRLKPILPSLISPTQCSFVPNRQITDNVIIVQEMFHSMRNKQGKKGFMAVK 580

Query: 144 VDMSKAFDRINWHTIITIMKSVGIDNHICNLVSNCISTPHFSVMVNG 4
           +D  KA+DR+ W  I   +  + I  H+ ++V NC+S+ +  ++ NG
Sbjct: 581 IDFEKAYDRLRWTFIRESLMELRIPQHLVDIVMNCVSSANLQILWNG 627


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/107 (48%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
 Frame = -3

Query: 324 YKIISKTLANRLKSTIFHSISPYQSAYVTGRQISDNVILAHEIFHTMNN-KKGLSGLMAI 148
           YK+ISK LANRLK  + + IS  QSA+V GR I+DNV+LA+EI H + + KKG  GL AI
Sbjct: 95  YKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVLLAYEIVHHLKSIKKGAGGLAAI 154

Query: 147 KVDMSKAFDRINWHTIITIMKSVGIDNHICNLVSNCISTPHFSVMVN 7
           K+DMSKA+DR+ W  +  +M+ +G D     L+  C++T  + + VN
Sbjct: 155 KLDMSKAYDRVEWSFLENMMRKMGFDEKWVQLIMKCVTTVTYKIKVN 201


>gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
          Length = 1546

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/108 (46%), Positives = 70/108 (64%)
 Frame = -3

Query: 324 YKIISKTLANRLKSTIFHSISPYQSAYVTGRQISDNVILAHEIFHTMNNKKGLSGLMAIK 145
           YK+ISK L+ RLK  +   IS +QSA+V GR I+DN++LA+E  HTM  KKG  GL A+K
Sbjct: 287 YKVISKMLSFRLKQILPEIISDHQSAFVPGRLITDNILLAYECIHTMKRKKGRKGLCAVK 346

Query: 144 VDMSKAFDRINWHTIITIMKSVGIDNHICNLVSNCISTPHFSVMVNGA 1
           +DM KA+DR+ W  +  IM  +G D     L+  C+S+  ++V  N A
Sbjct: 347 LDMHKAYDRVEWGFLEKIMTKLGFDQRWIKLIMACVSSVRYNVRFNNA 394


>gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 566

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/108 (47%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
 Frame = -3

Query: 324 YKIISKTLANRLKSTIFHSISPYQSAYVTGRQISDNVILAHEIFHTMNNKK-GLSGLMAI 148
           YKIISK LANRLKS +   I   QSA+V GR I+DNV++A+E  H + NK+ G  G  AI
Sbjct: 35  YKIISKVLANRLKSILPEIILDTQSAFVPGRLITDNVLIAYEATHFLQNKRNGKDGYAAI 94

Query: 147 KVDMSKAFDRINWHTIITIMKSVGIDNHICNLVSNCISTPHFSVMVNG 4
           K+DMSKA+DR+ W  ++ +++ +G D     L+ NC++T ++ + VNG
Sbjct: 95  KLDMSKAYDRVEWPFLLHMLRRLGFDEKWNRLIMNCVTTVNYKIKVNG 142


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