BLASTX nr result

ID: Coptis21_contig00038091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038091
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269501.1| PREDICTED: uridine-cytidine kinase C [Vitis ...    74   2e-13
ref|XP_002315982.1| predicted protein [Populus trichocarpa] gi|2...    73   4e-13
ref|XP_002312355.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-12
ref|XP_002890671.1| phosphoribulokinase/uridine kinase [Arabidop...    72   2e-12
ref|XP_002514541.1| uridine cytidine kinase I, putative [Ricinus...    74   2e-12

>ref|XP_002269501.1| PREDICTED: uridine-cytidine kinase C [Vitis vinifera]
           gi|297734126|emb|CBI15373.3| unnamed protein product
           [Vitis vinifera]
          Length = 661

 Score = 73.6 bits (179), Expect(2) = 2e-13
 Identities = 31/33 (93%), Positives = 33/33 (100%)
 Frame = +1

Query: 109 YDIYLLPPGEDPEACQSYLRMRNKDGKYNIMFE 207
           YDIYLLPPGEDPEACQSYLRMRN+DGKYN+MFE
Sbjct: 281 YDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFE 313



 Score = 26.6 bits (57), Expect(2) = 2e-13
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = +2

Query: 23  LQSRRTLTMDQIRAVLSKE 79
           L+S R L++DQI+AVLS+E
Sbjct: 254 LKSTRDLSVDQIKAVLSEE 272


>ref|XP_002315982.1| predicted protein [Populus trichocarpa] gi|222865022|gb|EEF02153.1|
           predicted protein [Populus trichocarpa]
          Length = 661

 Score = 73.2 bits (178), Expect(2) = 4e-13
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = +1

Query: 109 YDIYLLPPGEDPEACQSYLRMRNKDGKYNIMFE 207
           YDIYLLPPGEDPE CQSYLRMRNKDGKYN+MFE
Sbjct: 280 YDIYLLPPGEDPETCQSYLRMRNKDGKYNLMFE 312



 Score = 26.2 bits (56), Expect(2) = 4e-13
 Identities = 11/20 (55%), Positives = 18/20 (90%)
 Frame = +2

Query: 23  LQSRRTLTMDQIRAVLSKER 82
           L+S R +T+DQI+AVLS+++
Sbjct: 253 LKSARKVTVDQIKAVLSEDQ 272


>ref|XP_002312355.1| predicted protein [Populus trichocarpa] gi|222852175|gb|EEE89722.1|
           predicted protein [Populus trichocarpa]
          Length = 659

 Score = 73.6 bits (179), Expect(2) = 1e-12
 Identities = 31/33 (93%), Positives = 33/33 (100%)
 Frame = +1

Query: 109 YDIYLLPPGEDPEACQSYLRMRNKDGKYNIMFE 207
           YDIYLLPPGEDPE+CQSYLRMRNKDGKYN+MFE
Sbjct: 280 YDIYLLPPGEDPESCQSYLRMRNKDGKYNLMFE 312



 Score = 23.9 bits (50), Expect(2) = 1e-12
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +2

Query: 23  LQSRRTLTMDQIRAVLSKE 79
           L+S R +T+DQI+ VLS++
Sbjct: 253 LKSARKVTVDQIKPVLSED 271


>ref|XP_002890671.1| phosphoribulokinase/uridine kinase [Arabidopsis lyrata subsp.
           lyrata] gi|297336513|gb|EFH66930.1|
           phosphoribulokinase/uridine kinase [Arabidopsis lyrata
           subsp. lyrata]
          Length = 674

 Score = 72.4 bits (176), Expect(2) = 2e-12
 Identities = 35/54 (64%), Positives = 40/54 (74%)
 Frame = +1

Query: 109 YDIYLLPPGEDPEACQSYLRMRNKDGKYNIMFEVCPSVTLANFSTDVNSRVLVR 270
           YDIYLLPPGEDPE+CQSYLRMRNKDGKY++MFE   + T    S  +   V VR
Sbjct: 280 YDIYLLPPGEDPESCQSYLRMRNKDGKYSLMFEEWVTDTPFVISPRITFEVSVR 333



 Score = 24.6 bits (52), Expect(2) = 2e-12
 Identities = 10/18 (55%), Positives = 17/18 (94%)
 Frame = +2

Query: 23  LQSRRTLTMDQIRAVLSK 76
           L+SR+ +++DQI+AVLS+
Sbjct: 253 LKSRKDVSVDQIKAVLSE 270


>ref|XP_002514541.1| uridine cytidine kinase I, putative [Ricinus communis]
           gi|223546145|gb|EEF47647.1| uridine cytidine kinase I,
           putative [Ricinus communis]
          Length = 657

 Score = 73.6 bits (179), Expect(2) = 2e-12
 Identities = 31/33 (93%), Positives = 33/33 (100%)
 Frame = +1

Query: 109 YDIYLLPPGEDPEACQSYLRMRNKDGKYNIMFE 207
           YDIYLLPPGEDPE+CQSYLRMRNKDGKYN+MFE
Sbjct: 280 YDIYLLPPGEDPESCQSYLRMRNKDGKYNLMFE 312



 Score = 23.5 bits (49), Expect(2) = 2e-12
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +2

Query: 23  LQSRRTLTMDQIRAVLSKE 79
           L+S + + +DQI+AVLS+E
Sbjct: 253 LKSAKKVKVDQIKAVLSEE 271


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