BLASTX nr result

ID: Coptis21_contig00038060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038060
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528925.1| PREDICTED: rac-like GTP-binding protein ARAC...   124   1e-26
gb|AFK42778.1| unknown [Lotus japonicus]                              123   1e-26
gb|AFK36265.1| unknown [Lotus japonicus]                              123   1e-26
ref|XP_002284205.1| PREDICTED: rac-like GTP-binding protein ARAC...   123   2e-26
ref|XP_003620632.1| Rac-like GTP-binding protein [Medicago trunc...   122   2e-26

>ref|XP_003528925.1| PREDICTED: rac-like GTP-binding protein ARAC7-like [Glycine max]
          Length = 210

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/76 (81%), Positives = 65/76 (85%)
 Frame = -3

Query: 441 HTSSGVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDNAIKVVLQPPRRKEIAMKKR 262
           H  S VITSA+GEELRKQIGA AYIECSSKTQQNVKAVFD AIKVVLQPPRRKE+A KKR
Sbjct: 133 HMGSSVITSAEGEELRKQIGAVAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKEMARKKR 192

Query: 261 QRRSSHSCLRIMCGGC 214
            RRS  S + IMCGGC
Sbjct: 193 HRRSGCSFVSIMCGGC 208


>gb|AFK42778.1| unknown [Lotus japonicus]
          Length = 210

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/76 (81%), Positives = 66/76 (86%)
 Frame = -3

Query: 441 HTSSGVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDNAIKVVLQPPRRKEIAMKKR 262
           H  S VITSA+GEELRKQIGAAAYIECSSKTQQNVKAVFD AIKVVLQPPRRKE+A KKR
Sbjct: 133 HMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKEMASKKR 192

Query: 261 QRRSSHSCLRIMCGGC 214
            RRS  S + I+CGGC
Sbjct: 193 HRRSGCSFVGIVCGGC 208


>gb|AFK36265.1| unknown [Lotus japonicus]
          Length = 210

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/76 (81%), Positives = 66/76 (86%)
 Frame = -3

Query: 441 HTSSGVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDNAIKVVLQPPRRKEIAMKKR 262
           H  S VITSA+GEELRKQIGAAAYIECSSKTQQNVKAVFD AIKVVLQPPRRKE+A KKR
Sbjct: 133 HMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKEMASKKR 192

Query: 261 QRRSSHSCLRIMCGGC 214
            RRS  S + I+CGGC
Sbjct: 193 HRRSGCSFVGIVCGGC 208


>ref|XP_002284205.1| PREDICTED: rac-like GTP-binding protein ARAC7 isoform 1 [Vitis
           vinifera] gi|147781539|emb|CAN73708.1| hypothetical
           protein VITISV_023715 [Vitis vinifera]
           gi|297738799|emb|CBI28044.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  123 bits (308), Expect = 2e-26
 Identities = 61/76 (80%), Positives = 66/76 (86%)
 Frame = -3

Query: 441 HTSSGVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDNAIKVVLQPPRRKEIAMKKR 262
           H  S VITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFD AIKVVLQPPRRKE+A KKR
Sbjct: 132 HMGSNVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKEVARKKR 191

Query: 261 QRRSSHSCLRIMCGGC 214
           +R +  S + I+CGGC
Sbjct: 192 RRSTGCSIVSIVCGGC 207


>ref|XP_003620632.1| Rac-like GTP-binding protein [Medicago truncatula]
           gi|145700967|gb|ABH04325.2| ROP-like protein [Medicago
           truncatula] gi|355495647|gb|AES76850.1| Rac-like
           GTP-binding protein [Medicago truncatula]
          Length = 209

 Score =  122 bits (307), Expect = 2e-26
 Identities = 62/76 (81%), Positives = 65/76 (85%)
 Frame = -3

Query: 441 HTSSGVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDNAIKVVLQPPRRKEIAMKKR 262
           HT   VITSA+GEELRKQIGAAAYIECSSKTQQNVKAVFD AIKVVLQPPRRKE+  KKR
Sbjct: 132 HTGYNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKEMPRKKR 191

Query: 261 QRRSSHSCLRIMCGGC 214
           QRRS  S   I+CGGC
Sbjct: 192 QRRSGCSFAGIVCGGC 207


Top