BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038028
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   113   2e-23
ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]   112   4e-23
ref|XP_002308737.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23

>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  117 bits (292), Expect = 1e-24
 Identities = 51/69 (73%), Positives = 62/69 (89%)
 Frame = +3

Query: 3   RWKDVAKVRKMMSDIKLKKEPACSWVEIANAVHMFVANDDAHPQREDIRRMWEKLSKKIK 182
           RW+DVAKVRK+M D  +KKEPACSWVE+ N+VH+FVAND AHPQ+E I +MWEKL++KIK
Sbjct: 493 RWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIK 552

Query: 183 EVGYVPDTS 209
           E+GYVPDTS
Sbjct: 553 EIGYVPDTS 561


>ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/69 (73%), Positives = 59/69 (85%)
 Frame = +3

Query: 3   RWKDVAKVRKMMSDIKLKKEPACSWVEIANAVHMFVANDDAHPQREDIRRMWEKLSKKIK 182
           R  D AKVRKMM +  +KKEPACSWVEI N VH+FVANDD+HP RE+I+RMWEK+S KIK
Sbjct: 523 RLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIK 582

Query: 183 EVGYVPDTS 209
           E+GYVPDTS
Sbjct: 583 EIGYVPDTS 591


>ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/69 (73%), Positives = 59/69 (85%)
 Frame = +3

Query: 3   RWKDVAKVRKMMSDIKLKKEPACSWVEIANAVHMFVANDDAHPQREDIRRMWEKLSKKIK 182
           R  D AKVRKMM +  +KKEPACSWVEI N VH+FVANDD+HP RE+I+RMWEK+S KIK
Sbjct: 524 RLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIK 583

Query: 183 EVGYVPDTS 209
           E+GYVPDTS
Sbjct: 584 EIGYVPDTS 592


>emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  112 bits (279), Expect = 4e-23
 Identities = 49/69 (71%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   RWKDVAKVRKMMSDIKLKKEPACSWVEIANAVHMFVANDDAHPQREDIRRMWEKLSKKIK 182
           RW+DVAKVRKMM +  +KK+PACSWVEI NAVH+FVAND+ HPQ ++IR  WE++S KIK
Sbjct: 507 RWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIK 566

Query: 183 EVGYVPDTS 209
           E+GYVPDTS
Sbjct: 567 EIGYVPDTS 575


>ref|XP_002308737.1| predicted protein [Populus trichocarpa] gi|222854713|gb|EEE92260.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score =  111 bits (277), Expect = 7e-23
 Identities = 48/69 (69%), Positives = 58/69 (84%)
 Frame = +3

Query: 3   RWKDVAKVRKMMSDIKLKKEPACSWVEIANAVHMFVANDDAHPQREDIRRMWEKLSKKIK 182
           RW D AKVRKMM +  +KKEPACSWVE+ N VH+FVA+DDAHPQR +I  MWE++S KIK
Sbjct: 436 RWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIK 495

Query: 183 EVGYVPDTS 209
           E+GYVPD+S
Sbjct: 496 EIGYVPDSS 504