BLASTX nr result

ID: Coptis21_contig00037776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037776
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39748.3| unnamed protein product [Vitis vinifera]              144   1e-32
ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PAR...   144   1e-32
ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
emb|CAN76999.1| hypothetical protein VITISV_007764 [Vitis vinifera]   144   1e-32
ref|XP_003530802.1| PREDICTED: poly(A)-specific ribonuclease PAR...   142   2e-32

>emb|CBI39748.3| unnamed protein product [Vitis vinifera]
          Length = 715

 Score =  144 bits (362), Expect = 1e-32
 Identities = 65/81 (80%), Positives = 72/81 (88%)
 Frame = -1

Query: 251 LKTHVKLADFIAIDLEMTGVTSAPWRESLNFDRTDVRYLKVKDSAEKFAVVQFGVCPFRW 72
           L+ HV+ ADF+AIDLEMTGVTSAPWRES  FDR DV+YLKVKDSAEKFAVVQFGVCPFRW
Sbjct: 55  LRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDVQYLKVKDSAEKFAVVQFGVCPFRW 114

Query: 71  DSDKESFIAHPHTFYVFPRKE 9
           DS +  F+AHPH FYVFPR+E
Sbjct: 115 DSSRHCFVAHPHNFYVFPRQE 135


>ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 734

 Score =  144 bits (362), Expect = 1e-32
 Identities = 65/81 (80%), Positives = 72/81 (88%)
 Frame = -1

Query: 251 LKTHVKLADFIAIDLEMTGVTSAPWRESLNFDRTDVRYLKVKDSAEKFAVVQFGVCPFRW 72
           L+ HV+ ADF+AIDLEMTGVTSAPWRES  FDR DV+YLKVKDSAEKFAVVQFGVCPFRW
Sbjct: 55  LRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDVQYLKVKDSAEKFAVVQFGVCPFRW 114

Query: 71  DSDKESFIAHPHTFYVFPRKE 9
           DS +  F+AHPH FYVFPR+E
Sbjct: 115 DSSRHCFVAHPHNFYVFPRQE 135


>ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|222847638|gb|EEE85185.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  144 bits (362), Expect = 1e-32
 Identities = 66/81 (81%), Positives = 73/81 (90%)
 Frame = -1

Query: 251 LKTHVKLADFIAIDLEMTGVTSAPWRESLNFDRTDVRYLKVKDSAEKFAVVQFGVCPFRW 72
           LKTH+K ADF+AIDLEMTGVTSAPWRESL FDR DV+YLKVKDSAEKFAVVQ GVCPFRW
Sbjct: 42  LKTHLKAADFVAIDLEMTGVTSAPWRESLEFDRFDVKYLKVKDSAEKFAVVQLGVCPFRW 101

Query: 71  DSDKESFIAHPHTFYVFPRKE 9
           D  + SFIAHPH F++FPR+E
Sbjct: 102 DPLRLSFIAHPHNFFIFPRQE 122


>emb|CAN76999.1| hypothetical protein VITISV_007764 [Vitis vinifera]
          Length = 720

 Score =  144 bits (362), Expect = 1e-32
 Identities = 65/81 (80%), Positives = 72/81 (88%)
 Frame = -1

Query: 251 LKTHVKLADFIAIDLEMTGVTSAPWRESLNFDRTDVRYLKVKDSAEKFAVVQFGVCPFRW 72
           L+ HV+ ADF+AIDLEMTGVTSAPWRES  FDR DV+YLKVKDSAEKFAVVQFGVCPFRW
Sbjct: 55  LRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDVQYLKVKDSAEKFAVVQFGVCPFRW 114

Query: 71  DSDKESFIAHPHTFYVFPRKE 9
           DS +  F+AHPH FYVFPR+E
Sbjct: 115 DSSRHCFVAHPHNFYVFPRQE 135


>ref|XP_003530802.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 718

 Score =  142 bits (359), Expect = 2e-32
 Identities = 64/81 (79%), Positives = 72/81 (88%)
 Frame = -1

Query: 251 LKTHVKLADFIAIDLEMTGVTSAPWRESLNFDRTDVRYLKVKDSAEKFAVVQFGVCPFRW 72
           L+ HV+ +DF+AIDLEMTGVTSAPWRESL FDR+DVRYLKV+DSA KFAVVQFGVCPFRW
Sbjct: 49  LRHHVRCSDFVAIDLEMTGVTSAPWRESLAFDRSDVRYLKVRDSAAKFAVVQFGVCPFRW 108

Query: 71  DSDKESFIAHPHTFYVFPRKE 9
           D    SF+AHPH FYVFPR+E
Sbjct: 109 DPSNHSFVAHPHNFYVFPRQE 129


Top