BLASTX nr result

ID: Coptis21_contig00037758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037758
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528282.1| PREDICTED: uncharacterized protein LOC100815...   124   8e-27
ref|XP_003524000.1| PREDICTED: uncharacterized protein LOC100805...   122   4e-26
ref|XP_002529355.1| conserved hypothetical protein [Ricinus comm...   120   9e-26
ref|XP_002332381.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
emb|CBI28139.3| unnamed protein product [Vitis vinifera]              105   5e-21

>ref|XP_003528282.1| PREDICTED: uncharacterized protein LOC100815083 [Glycine max]
          Length = 397

 Score =  124 bits (311), Expect = 8e-27
 Identities = 67/117 (57%), Positives = 85/117 (72%), Gaps = 2/117 (1%)
 Frame = +1

Query: 13  MDGTRNMPA-NGVGLCLLPSELIQEILLRLVLPEIFQVKSVSKLITSVICCNSFRNEFNT 189
           MD  RN    N VGLCLLP ELIQ I L LVLPEI ++K ++K  + +I  N+F  ++N+
Sbjct: 1   MDDHRNSTTKNAVGLCLLPQELIQNIFLSLVLPEIIRLKLLNKSFSRIISDNTFVRQYNS 60

Query: 190 RSSSDTWLFVYKKRSLRDSFLYSFTYR-SNRWFKIPMAQFLFPIVPPGEDLYFLTAS 357
            S+S TWLFVYKKR LRD+ L+SFT R S+RWF+IP+++ L PI   GEDLYFL AS
Sbjct: 61  LSTSTTWLFVYKKRWLRDAALHSFTDRSSDRWFRIPISELLKPIQFHGEDLYFLAAS 117


>ref|XP_003524000.1| PREDICTED: uncharacterized protein LOC100805433 [Glycine max]
          Length = 395

 Score =  122 bits (305), Expect = 4e-26
 Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 2/117 (1%)
 Frame = +1

Query: 13  MDGTRNM-PANGVGLCLLPSELIQEILLRLVLPEIFQVKSVSKLITSVICCNSFRNEFNT 189
           MD  RN  P N +GLCLLP ELIQ I L LVLPEI ++K V+K  + +I  ++F  + N 
Sbjct: 1   MDDHRNSTPKNAIGLCLLPQELIQNIFLSLVLPEIIRLKLVNKSFSRIISDHAFVRQCNN 60

Query: 190 RSSSDTWLFVYKKRSLRDSFLYSFTYR-SNRWFKIPMAQFLFPIVPPGEDLYFLTAS 357
            S+S TWLFVYKKR LRD+ L++FT R S+RWF+IP+++ L PI   GEDLYFL AS
Sbjct: 61  FSTSTTWLFVYKKRWLRDAVLHAFTDRSSDRWFRIPISELLKPIHFHGEDLYFLAAS 117


>ref|XP_002529355.1| conserved hypothetical protein [Ricinus communis]
           gi|223531175|gb|EEF33022.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/115 (51%), Positives = 78/115 (67%)
 Frame = +1

Query: 13  MDGTRNMPANGVGLCLLPSELIQEILLRLVLPEIFQVKSVSKLITSVICCNSFRNEFNTR 192
           M+  RN  +N +G CLLP ELIQ ILL L LPEI  +KS++K I+ +I    F  E+N++
Sbjct: 1   MENPRNSSSNAIGFCLLPCELIQHILLNLALPEIIGLKSLNKSISDIISDQVFVREYNSK 60

Query: 193 SSSDTWLFVYKKRSLRDSFLYSFTYRSNRWFKIPMAQFLFPIVPPGEDLYFLTAS 357
           S S  WLFVYKKR  RD+ L+ FT  S+RWFK+ +A  L PI+  G+ +YFL AS
Sbjct: 61  SRSTNWLFVYKKRWHRDAVLHGFTDHSDRWFKLQIADLLKPIICTGDSVYFLAAS 115


>ref|XP_002332381.1| predicted protein [Populus trichocarpa] gi|222832205|gb|EEE70682.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/106 (50%), Positives = 72/106 (67%)
 Frame = +1

Query: 40  NGVGLCLLPSELIQEILLRLVLPEIFQVKSVSKLITSVICCNSFRNEFNTRSSSDTWLFV 219
           N +G CLLPSE+IQ ILL L LPEI  +KS+++ +  VI    F   +N+++ S  WLFV
Sbjct: 11  NTIGFCLLPSEIIQNILLHLALPEIICLKSLNRFVADVISDKYFVRAYNSQARSTAWLFV 70

Query: 220 YKKRSLRDSFLYSFTYRSNRWFKIPMAQFLFPIVPPGEDLYFLTAS 357
           YKKR  RD+ L+ F  +SNRWF   +   L PI+ PG+D+YFLTAS
Sbjct: 71  YKKRWNRDALLHGFNDQSNRWFSFQIDSLLNPIIRPGDDIYFLTAS 116


>emb|CBI28139.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/104 (49%), Positives = 69/104 (66%)
 Frame = +1

Query: 46  VGLCLLPSELIQEILLRLVLPEIFQVKSVSKLITSVICCNSFRNEFNTRSSSDTWLFVYK 225
           VG   LPSEL+Q I LRL LP+I +++S++K I S++    F  + NT+  S  WLF+Y 
Sbjct: 35  VGFSCLPSELLQSIFLRLALPDIVRLRSINKSIASIVSDKDFVRDCNTQFLSANWLFIYS 94

Query: 226 KRSLRDSFLYSFTYRSNRWFKIPMAQFLFPIVPPGEDLYFLTAS 357
           K   RDS L+ FT +S+ WFKIP+A  L P++   EDLYFL AS
Sbjct: 95  KGWRRDSVLHGFTDQSDHWFKIPIAGLLMPVIHATEDLYFLAAS 138


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