BLASTX nr result

ID: Coptis21_contig00037623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037623
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002443069.1| hypothetical protein SORBIDRAFT_08g007560 [S...    59   4e-07

>ref|XP_002443069.1| hypothetical protein SORBIDRAFT_08g007560 [Sorghum bicolor]
           gi|241943762|gb|EES16907.1| hypothetical protein
           SORBIDRAFT_08g007560 [Sorghum bicolor]
          Length = 713

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/118 (28%), Positives = 56/118 (47%)
 Frame = -1

Query: 357 GSYPRVRGHLMKVAGSGSKSCAKVTVEHLAEMKKNIEEYELKLRNSLSKQVPLPPFXXXX 178
           GSY R++ HL++++G G K C  V    LA++K  + E   ++  S +K +PLP      
Sbjct: 51  GSYSRIKSHLLRISGGGIKICTAVDKFILAQLKSEVAEAADEIERSKAKVIPLP------ 104

Query: 177 XXXXXXXXXXXTMGVFETSHXXXXXXXXXXXQSPIEKAYNMKARDELTSVIVRMFYSG 4
                           E               S +EKA++M+ R++L ++I R+FYSG
Sbjct: 105 ---------------VENVDASNSMRNKRQRSSALEKAFDMETRNQLDAIIGRLFYSG 147


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