BLASTX nr result

ID: Coptis21_contig00037543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037543
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...    94   2e-35
ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...    89   9e-35
ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819...    89   4e-34
ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784...    88   5e-34
ref|XP_002332238.1| predicted protein [Populus trichocarpa] gi|2...    84   6e-33

>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score = 93.6 bits (231), Expect(2) = 2e-35
 Identities = 46/73 (63%), Positives = 59/73 (80%)
 Frame = +3

Query: 3   DFCAASLMMLDNELENYIFDVRSSKDFLELEGISDLAKKMVDTKRNIVYPLVYSLLTLAL 182
           +F   SL++LD++LE YIFD+R S +F  L+GISDL+KKMV  K++I YPLVY LL LA+
Sbjct: 766 EFSPTSLVLLDSQLETYIFDMRRSVEFASLKGISDLSKKMVALKKHIDYPLVYGLLKLAM 825

Query: 183 ILPVATATVERVF 221
           ILPVAT+TVER F
Sbjct: 826 ILPVATSTVERAF 838



 Score = 80.9 bits (198), Expect(2) = 2e-35
 Identities = 36/52 (69%), Positives = 44/52 (84%)
 Frame = +1

Query: 220 FSAMHIIKARLRNRMGDMWLNDCMVTFIEKDVFAKVDDEAIMQHFQKMKKRR 375
           FSAM I+K+RLRNRMGD W+NDC+VT+IE+DV  K+DDE I+Q FQKM  RR
Sbjct: 838 FSAMKIVKSRLRNRMGDDWMNDCLVTYIERDVADKIDDELIIQRFQKMATRR 889


>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score = 88.6 bits (218), Expect(2) = 9e-35
 Identities = 40/73 (54%), Positives = 58/73 (79%)
 Frame = +3

Query: 3   DFCAASLMMLDNELENYIFDVRSSKDFLELEGISDLAKKMVDTKRNIVYPLVYSLLTLAL 182
           +F    LM+L ++L+ YI D+R   +F ++EGI+ LA+KMV TK+N+++PLVY L+ L+L
Sbjct: 662 EFSIVDLMILGDQLDTYIIDLRGDDEFSDIEGIASLAEKMVKTKKNLIFPLVYMLIKLSL 721

Query: 183 ILPVATATVERVF 221
           +LPVATATVERVF
Sbjct: 722 LLPVATATVERVF 734



 Score = 83.6 bits (205), Expect(2) = 9e-35
 Identities = 36/52 (69%), Positives = 45/52 (86%)
 Frame = +1

Query: 220 FSAMHIIKARLRNRMGDMWLNDCMVTFIEKDVFAKVDDEAIMQHFQKMKKRR 375
           FSAMHI+K+RLRNRMGD W+ND +V +IEKD+F K+D+EAIM+ FQ MK RR
Sbjct: 734 FSAMHIVKSRLRNRMGDKWMNDSLVVYIEKDIFDKIDNEAIMKRFQNMKTRR 785


>ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819269 [Glycine max]
          Length = 557

 Score = 88.6 bits (218), Expect(2) = 4e-34
 Identities = 43/73 (58%), Positives = 60/73 (82%)
 Frame = +3

Query: 3   DFCAASLMMLDNELENYIFDVRSSKDFLELEGISDLAKKMVDTKRNIVYPLVYSLLTLAL 182
           +F A +L+MLDN+LE YI D+RS+ +   L+GI +L++K+V+T R+IVYPLVY LL LA+
Sbjct: 431 EFSAINLVMLDNQLETYIIDMRSNVELSFLKGIKNLSEKLVETGRHIVYPLVYLLLKLAM 490

Query: 183 ILPVATATVERVF 221
           ILPVAT+T+ER F
Sbjct: 491 ILPVATSTMERAF 503



 Score = 81.3 bits (199), Expect(2) = 4e-34
 Identities = 35/52 (67%), Positives = 44/52 (84%)
 Frame = +1

Query: 220 FSAMHIIKARLRNRMGDMWLNDCMVTFIEKDVFAKVDDEAIMQHFQKMKKRR 375
           FSAM I+K RLRNR+GD W+NDC+VT+IEKD+F K+D+E I+Q FQ MK RR
Sbjct: 503 FSAMKIVKNRLRNRLGDAWMNDCLVTYIEKDMFNKIDNERIIQRFQNMKSRR 554


>ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784329 [Glycine max]
          Length = 428

 Score = 87.8 bits (216), Expect(2) = 5e-34
 Identities = 41/73 (56%), Positives = 60/73 (82%)
 Frame = +3

Query: 3   DFCAASLMMLDNELENYIFDVRSSKDFLELEGISDLAKKMVDTKRNIVYPLVYSLLTLAL 182
           +F A +L+ML+N+LE YI D+R++ +F  L+GI ++ +K+V+T+R+IVYPLVY LL LA+
Sbjct: 302 EFSAINLVMLNNQLETYIIDMRNNIEFSSLKGIKNIYEKLVETRRHIVYPLVYLLLKLAM 361

Query: 183 ILPVATATVERVF 221
           ILPVAT T+ER F
Sbjct: 362 ILPVATTTMERAF 374



 Score = 81.6 bits (200), Expect(2) = 5e-34
 Identities = 36/51 (70%), Positives = 43/51 (84%)
 Frame = +1

Query: 220 FSAMHIIKARLRNRMGDMWLNDCMVTFIEKDVFAKVDDEAIMQHFQKMKKR 372
           FSAM I+K RLRNRMGD W+NDC+VT+IEKDVF K+D+E I+Q FQ MK R
Sbjct: 374 FSAMKIVKNRLRNRMGDAWMNDCLVTYIEKDVFNKIDNELIIQQFQNMKSR 424


>ref|XP_002332238.1| predicted protein [Populus trichocarpa] gi|222831851|gb|EEE70328.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score = 84.0 bits (206), Expect(2) = 6e-33
 Identities = 38/66 (57%), Positives = 54/66 (81%)
 Frame = +3

Query: 24  MMLDNELENYIFDVRSSKDFLELEGISDLAKKMVDTKRNIVYPLVYSLLTLALILPVATA 203
           M+L ++L+ YI D+R   +F  +EGI+ LA+KMV TK+N+++PLVY L+ L+L+LPVATA
Sbjct: 1   MVLGDQLDTYIIDLRGDDEFSSIEGIASLAEKMVKTKKNLIFPLVYMLIKLSLLLPVATA 60

Query: 204 TVERVF 221
           TVERVF
Sbjct: 61  TVERVF 66



 Score = 82.0 bits (201), Expect(2) = 6e-33
 Identities = 35/52 (67%), Positives = 44/52 (84%)
 Frame = +1

Query: 220 FSAMHIIKARLRNRMGDMWLNDCMVTFIEKDVFAKVDDEAIMQHFQKMKKRR 375
           FSAMHI+K+RLRNRMGD W+ND +V +IEKD+F K+D+E IM+ FQ MK RR
Sbjct: 66  FSAMHIVKSRLRNRMGDKWMNDSLVVYIEKDIFDKIDNETIMKRFQNMKTRR 117


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