BLASTX nr result

ID: Coptis21_contig00037491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037491
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003558086.1| PREDICTED: peptide chain release factor 2-li...   289   2e-76
emb|CBI39588.3| unnamed protein product [Vitis vinifera]              287   6e-76
ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-li...   287   6e-76
emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]   287   6e-76
ref|XP_002512504.1| peptide chain release factor, putative [Rici...   280   1e-73

>ref|XP_003558086.1| PREDICTED: peptide chain release factor 2-like [Brachypodium
           distachyon]
          Length = 465

 Score =  289 bits (739), Expect = 2e-76
 Identities = 139/163 (85%), Positives = 156/163 (95%)
 Frame = -1

Query: 536 RRHTSFVAVAVTPILGDASSRFKINESDLQIERFRSGGAGGQHANTTESAVRIVHIPTGV 357
           RRHTSF AVAV PILGDASSR++IN+SDL+IERFRSGG GGQHANTTESAVRIVHIPTG 
Sbjct: 303 RRHTSFAAVAVIPILGDASSRYQINDSDLRIERFRSGGPGGQHANTTESAVRIVHIPTGT 362

Query: 356 TATCQNERSQHRNKAMAMSVLQSRLDQLEITRQAQLNAQHTESLTEISWGNQIRTYVLHP 177
           TATCQNERSQH NKA AM+VLQSRLDQLEITRQAQ+NA+HT+SL+EISWGNQIR+YVLHP
Sbjct: 363 TATCQNERSQHMNKASAMAVLQSRLDQLEITRQAQMNAEHTQSLSEISWGNQIRSYVLHP 422

Query: 176 YRMVKDLRTNYEVSDPDSVLEGDIDDFIMSFLSASIDKEEGNL 48
           YRMVKDLRTNYEVSDPDSVLEGD+DDFI +FLS+S+DK++GN+
Sbjct: 423 YRMVKDLRTNYEVSDPDSVLEGDLDDFIFNFLSSSLDKDDGNV 465


>emb|CBI39588.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  287 bits (735), Expect = 6e-76
 Identities = 140/161 (86%), Positives = 154/161 (95%)
 Frame = -1

Query: 536 RRHTSFVAVAVTPILGDASSRFKINESDLQIERFRSGGAGGQHANTTESAVRIVHIPTGV 357
           RRHTSF AVAV PILGDASS  +INESDL+IERFR+GGAGGQH NTTESAVRIVHIPTGV
Sbjct: 308 RRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGV 367

Query: 356 TATCQNERSQHRNKAMAMSVLQSRLDQLEITRQAQLNAQHTESLTEISWGNQIRTYVLHP 177
           TATCQNERSQH+NKA AM+VLQSRLDQLEI+RQAQ+NAQHT+SLT+ISWGNQIRTYVLHP
Sbjct: 368 TATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQIRTYVLHP 427

Query: 176 YRMVKDLRTNYEVSDPDSVLEGDIDDFIMSFLSASIDKEEG 54
           YRMVKDLRTNYEVSDPDSVLEGD+D FI+S+LSAS+DK+EG
Sbjct: 428 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 468


>ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 434

 Score =  287 bits (735), Expect = 6e-76
 Identities = 140/161 (86%), Positives = 154/161 (95%)
 Frame = -1

Query: 536 RRHTSFVAVAVTPILGDASSRFKINESDLQIERFRSGGAGGQHANTTESAVRIVHIPTGV 357
           RRHTSF AVAV PILGDASS  +INESDL+IERFR+GGAGGQH NTTESAVRIVHIPTGV
Sbjct: 270 RRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGV 329

Query: 356 TATCQNERSQHRNKAMAMSVLQSRLDQLEITRQAQLNAQHTESLTEISWGNQIRTYVLHP 177
           TATCQNERSQH+NKA AM+VLQSRLDQLEI+RQAQ+NAQHT+SLT+ISWGNQIRTYVLHP
Sbjct: 330 TATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQIRTYVLHP 389

Query: 176 YRMVKDLRTNYEVSDPDSVLEGDIDDFIMSFLSASIDKEEG 54
           YRMVKDLRTNYEVSDPDSVLEGD+D FI+S+LSAS+DK+EG
Sbjct: 390 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 430


>emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]
          Length = 426

 Score =  287 bits (735), Expect = 6e-76
 Identities = 140/161 (86%), Positives = 154/161 (95%)
 Frame = -1

Query: 536 RRHTSFVAVAVTPILGDASSRFKINESDLQIERFRSGGAGGQHANTTESAVRIVHIPTGV 357
           RRHTSF AVAV PILGDASS  +INESDL+IERFR+GGAGGQH NTTESAVRIVHIPTGV
Sbjct: 262 RRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGV 321

Query: 356 TATCQNERSQHRNKAMAMSVLQSRLDQLEITRQAQLNAQHTESLTEISWGNQIRTYVLHP 177
           TATCQNERSQH+NKA AM+VLQSRLDQLEI+RQAQ+NAQHT+SLT+ISWGNQIRTYVLHP
Sbjct: 322 TATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQIRTYVLHP 381

Query: 176 YRMVKDLRTNYEVSDPDSVLEGDIDDFIMSFLSASIDKEEG 54
           YRMVKDLRTNYEVSDPDSVLEGD+D FI+S+LSAS+DK+EG
Sbjct: 382 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 422


>ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis]
           gi|223548465|gb|EEF49956.1| peptide chain release
           factor, putative [Ricinus communis]
          Length = 550

 Score =  280 bits (716), Expect = 1e-73
 Identities = 137/160 (85%), Positives = 150/160 (93%)
 Frame = -1

Query: 536 RRHTSFVAVAVTPILGDASSRFKINESDLQIERFRSGGAGGQHANTTESAVRIVHIPTGV 357
           RRHTSF AVAV PILGD S+  +INESDL+IER+RSGG GGQHANTTESAVRIVHIPTGV
Sbjct: 340 RRHTSFAAVAVIPILGDGSTHVQINESDLRIERYRSGGPGGQHANTTESAVRIVHIPTGV 399

Query: 356 TATCQNERSQHRNKAMAMSVLQSRLDQLEITRQAQLNAQHTESLTEISWGNQIRTYVLHP 177
           TATCQNERSQH NKA AM+VLQSRLDQLE+ RQAQ+NAQHT+SLTEISWGNQIRTYVLHP
Sbjct: 400 TATCQNERSQHMNKASAMAVLQSRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHP 459

Query: 176 YRMVKDLRTNYEVSDPDSVLEGDIDDFIMSFLSASIDKEE 57
           YRMVKDLRTNYEVSDPDSVLEG+ID FI+S+LSAS+DK+E
Sbjct: 460 YRMVKDLRTNYEVSDPDSVLEGEIDGFILSYLSASLDKDE 499


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