BLASTX nr result

ID: Coptis21_contig00037483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037483
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 64   2e-12
emb|CAN64613.1| hypothetical protein VITISV_030850 [Vitis vinifera]    62   7e-11
gb|AAU90288.2| Polyprotein, putative [Solanum demissum]                65   8e-11
emb|CAN77322.1| hypothetical protein VITISV_002172 [Vitis vinifera]    61   1e-10
emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]    59   2e-10

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 64.3 bits (155), Expect(2) = 2e-12
 Identities = 33/59 (55%), Positives = 46/59 (77%)
 Frame = -3

Query: 201  GSI*R*EARPVAK*YHEKQGIDYSDTFSPVPKPATIKILLSIALQFD*PIKQLEVSKLF 25
            G+I R +AR VAK +H+++G+D+S+TFSPV KP TI+ILLSIA+ +   I QL+VS  F
Sbjct: 1204 GTIERYKARLVAKGFHQQEGLDFSETFSPVAKPTTIRILLSIAVSYYWFIHQLDVSNAF 1262



 Score = 32.7 bits (73), Expect(2) = 2e-12
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -1

Query: 251  VGCK*VFKIKHKADGRREVFK 189
            VGCK VFK+KHK DG  E +K
Sbjct: 1190 VGCKWVFKVKHKPDGTIERYK 1210


>emb|CAN64613.1| hypothetical protein VITISV_030850 [Vitis vinifera]
          Length = 598

 Score = 62.4 bits (150), Expect(2) = 7e-11
 Identities = 32/59 (54%), Positives = 41/59 (69%)
 Frame = -3

Query: 201 GSI*R*EARPVAK*YHEKQGIDYSDTFSPVPKPATIKILLSIALQFD*PIKQLEVSKLF 25
           GSI R +AR VAK Y +K GIDY +TFSPV K  T+++LLS+A   D P+ QL+V   F
Sbjct: 178 GSIDRYKARLVAKGYTQKHGIDYQETFSPVAKLKTVRVLLSLAANLDWPLHQLDVKNAF 236



 Score = 29.3 bits (64), Expect(2) = 7e-11
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 251 VGCK*VFKIKHKADGRREVFK 189
           VGCK +F IK+KADG  + +K
Sbjct: 164 VGCKWIFSIKYKADGSIDRYK 184


>gb|AAU90288.2| Polyprotein, putative [Solanum demissum]
          Length = 1017

 Score = 65.1 bits (157), Expect(2) = 8e-11
 Identities = 31/59 (52%), Positives = 45/59 (76%)
 Frame = -3

Query: 201 GSI*R*EARPVAK*YHEKQGIDYSDTFSPVPKPATIKILLSIALQFD*PIKQLEVSKLF 25
           GS+ R +AR VAK YH++ G+D++DTFSPV KPATI++LLS+A+     + QL++S  F
Sbjct: 691 GSLDRYKARLVAKGYHQRPGLDFADTFSPVVKPATIRLLLSLAVSHQWHVTQLDISNAF 749



 Score = 26.2 bits (56), Expect(2) = 8e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 260 KTFVGCK*VFKIKHKADGRREVFK 189
           +  +GCK VFK K K+DG  + +K
Sbjct: 674 QNIIGCKWVFKRKLKSDGSLDRYK 697


>emb|CAN77322.1| hypothetical protein VITISV_002172 [Vitis vinifera]
          Length = 776

 Score = 61.2 bits (147), Expect(2) = 1e-10
 Identities = 30/59 (50%), Positives = 41/59 (69%)
 Frame = -3

Query: 201 GSI*R*EARPVAK*YHEKQGIDYSDTFSPVPKPATIKILLSIALQFD*PIKQLEVSKLF 25
           GSI R +AR VAK Y +K GIDY +TFSPV K  T+++LLS+A   D P+ Q+++   F
Sbjct: 373 GSIDRYKARLVAKGYTQKHGIDYQETFSPVAKLKTVRVLLSLAANLDWPLHQIDIKNAF 431



 Score = 29.3 bits (64), Expect(2) = 1e-10
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 251 VGCK*VFKIKHKADGRREVFK 189
           VGCK +F IK+KADG  + +K
Sbjct: 359 VGCKWIFSIKYKADGSIDRYK 379


>emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]
          Length = 1319

 Score = 59.3 bits (142), Expect(2) = 2e-10
 Identities = 31/59 (52%), Positives = 43/59 (72%)
 Frame = -3

Query: 201  GSI*R*EARPVAK*YHEKQGIDYSDTFSPVPKPATIKILLSIALQFD*PIKQLEVSKLF 25
            GSI R +A+ VAK Y++  G+DY +TFSPV K ATI+I+L++AL F   I+QL+V   F
Sbjct: 875  GSIERYKAQLVAKGYNQTHGLDYFETFSPVVKAATIRIILTMALSFQWEIRQLDVHNAF 933



 Score = 30.8 bits (68), Expect(2) = 2e-10
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 251 VGCK*VFKIKHKADGRREVFK 189
           +GCK V+K+KHK DG  E +K
Sbjct: 861 IGCKWVYKLKHKPDGSIERYK 881


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