BLASTX nr result
ID: Coptis21_contig00037483
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00037483 (347 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCH50966.1| T4.5 [Malus x robusta] 64 2e-12 emb|CAN64613.1| hypothetical protein VITISV_030850 [Vitis vinifera] 62 7e-11 gb|AAU90288.2| Polyprotein, putative [Solanum demissum] 65 8e-11 emb|CAN77322.1| hypothetical protein VITISV_002172 [Vitis vinifera] 61 1e-10 emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera] 59 2e-10 >emb|CCH50966.1| T4.5 [Malus x robusta] Length = 1670 Score = 64.3 bits (155), Expect(2) = 2e-12 Identities = 33/59 (55%), Positives = 46/59 (77%) Frame = -3 Query: 201 GSI*R*EARPVAK*YHEKQGIDYSDTFSPVPKPATIKILLSIALQFD*PIKQLEVSKLF 25 G+I R +AR VAK +H+++G+D+S+TFSPV KP TI+ILLSIA+ + I QL+VS F Sbjct: 1204 GTIERYKARLVAKGFHQQEGLDFSETFSPVAKPTTIRILLSIAVSYYWFIHQLDVSNAF 1262 Score = 32.7 bits (73), Expect(2) = 2e-12 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -1 Query: 251 VGCK*VFKIKHKADGRREVFK 189 VGCK VFK+KHK DG E +K Sbjct: 1190 VGCKWVFKVKHKPDGTIERYK 1210 >emb|CAN64613.1| hypothetical protein VITISV_030850 [Vitis vinifera] Length = 598 Score = 62.4 bits (150), Expect(2) = 7e-11 Identities = 32/59 (54%), Positives = 41/59 (69%) Frame = -3 Query: 201 GSI*R*EARPVAK*YHEKQGIDYSDTFSPVPKPATIKILLSIALQFD*PIKQLEVSKLF 25 GSI R +AR VAK Y +K GIDY +TFSPV K T+++LLS+A D P+ QL+V F Sbjct: 178 GSIDRYKARLVAKGYTQKHGIDYQETFSPVAKLKTVRVLLSLAANLDWPLHQLDVKNAF 236 Score = 29.3 bits (64), Expect(2) = 7e-11 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -1 Query: 251 VGCK*VFKIKHKADGRREVFK 189 VGCK +F IK+KADG + +K Sbjct: 164 VGCKWIFSIKYKADGSIDRYK 184 >gb|AAU90288.2| Polyprotein, putative [Solanum demissum] Length = 1017 Score = 65.1 bits (157), Expect(2) = 8e-11 Identities = 31/59 (52%), Positives = 45/59 (76%) Frame = -3 Query: 201 GSI*R*EARPVAK*YHEKQGIDYSDTFSPVPKPATIKILLSIALQFD*PIKQLEVSKLF 25 GS+ R +AR VAK YH++ G+D++DTFSPV KPATI++LLS+A+ + QL++S F Sbjct: 691 GSLDRYKARLVAKGYHQRPGLDFADTFSPVVKPATIRLLLSLAVSHQWHVTQLDISNAF 749 Score = 26.2 bits (56), Expect(2) = 8e-11 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -1 Query: 260 KTFVGCK*VFKIKHKADGRREVFK 189 + +GCK VFK K K+DG + +K Sbjct: 674 QNIIGCKWVFKRKLKSDGSLDRYK 697 >emb|CAN77322.1| hypothetical protein VITISV_002172 [Vitis vinifera] Length = 776 Score = 61.2 bits (147), Expect(2) = 1e-10 Identities = 30/59 (50%), Positives = 41/59 (69%) Frame = -3 Query: 201 GSI*R*EARPVAK*YHEKQGIDYSDTFSPVPKPATIKILLSIALQFD*PIKQLEVSKLF 25 GSI R +AR VAK Y +K GIDY +TFSPV K T+++LLS+A D P+ Q+++ F Sbjct: 373 GSIDRYKARLVAKGYTQKHGIDYQETFSPVAKLKTVRVLLSLAANLDWPLHQIDIKNAF 431 Score = 29.3 bits (64), Expect(2) = 1e-10 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -1 Query: 251 VGCK*VFKIKHKADGRREVFK 189 VGCK +F IK+KADG + +K Sbjct: 359 VGCKWIFSIKYKADGSIDRYK 379 >emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera] Length = 1319 Score = 59.3 bits (142), Expect(2) = 2e-10 Identities = 31/59 (52%), Positives = 43/59 (72%) Frame = -3 Query: 201 GSI*R*EARPVAK*YHEKQGIDYSDTFSPVPKPATIKILLSIALQFD*PIKQLEVSKLF 25 GSI R +A+ VAK Y++ G+DY +TFSPV K ATI+I+L++AL F I+QL+V F Sbjct: 875 GSIERYKAQLVAKGYNQTHGLDYFETFSPVVKAATIRIILTMALSFQWEIRQLDVHNAF 933 Score = 30.8 bits (68), Expect(2) = 2e-10 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -1 Query: 251 VGCK*VFKIKHKADGRREVFK 189 +GCK V+K+KHK DG E +K Sbjct: 861 IGCKWVYKLKHKPDGSIERYK 881