BLASTX nr result

ID: Coptis21_contig00037477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037477
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334881.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-49
ref|XP_002321596.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-48
ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|...   174   5e-42
emb|CBI24723.3| unnamed protein product [Vitis vinifera]               93   2e-17
emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]    91   7e-17

>ref|XP_002334881.1| predicted protein [Populus trichocarpa] gi|222831996|gb|EEE70473.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  199 bits (507), Expect = 1e-49
 Identities = 95/129 (73%), Positives = 111/129 (86%)
 Frame = +2

Query: 2   SNDSVVVYSNNDSADMSNLYMKEMSSLITPERLDGTNYIEWSLNAQNKIRGRKRWGFISG 181
           +ND  VV + N    +  L+M+++SSL+TPE+LDGTNY+EW+LNAQNKIRGRKRWGFISG
Sbjct: 5   TNDDGVV-AGNAKVTLPALHMQDVSSLLTPEKLDGTNYVEWALNAQNKIRGRKRWGFISG 63

Query: 182 TKAAPTNINSEEYEAWEDENCLVKSWLLDAMTKDIRSIFLCLSTAKEIWNTAKQTYSVNQ 361
           +K AP + NSEEYEAWEDENCL+KSWLLDAM KDIRSIFL L TAKEIW+ AKQTYSV+Q
Sbjct: 64  SKTAPNDTNSEEYEAWEDENCLIKSWLLDAMNKDIRSIFLRLPTAKEIWDMAKQTYSVSQ 123

Query: 362 DASKDYQLY 388
           DASK YQLY
Sbjct: 124 DASKSYQLY 132


>ref|XP_002321596.1| predicted protein [Populus trichocarpa] gi|222868592|gb|EEF05723.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/129 (71%), Positives = 110/129 (85%)
 Frame = +2

Query: 2   SNDSVVVYSNNDSADMSNLYMKEMSSLITPERLDGTNYIEWSLNAQNKIRGRKRWGFISG 181
           +ND  VV + N    +  L+M+++SSL+TP++LDGTNY+EW+LNAQNKIRG+KRW FISG
Sbjct: 5   TNDDGVV-AGNAKVTLPALHMQDVSSLLTPDKLDGTNYVEWALNAQNKIRGQKRWRFISG 63

Query: 182 TKAAPTNINSEEYEAWEDENCLVKSWLLDAMTKDIRSIFLCLSTAKEIWNTAKQTYSVNQ 361
           +K AP + NSEEYEAWEDENCL+KSWLLDAM KDIRSIFL L TAKEIW+ AKQTYSV+Q
Sbjct: 64  SKTAPNDTNSEEYEAWEDENCLIKSWLLDAMNKDIRSIFLRLPTAKEIWDMAKQTYSVSQ 123

Query: 362 DASKDYQLY 388
           DASK YQLY
Sbjct: 124 DASKSYQLY 132


>ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula]
           gi|355486266|gb|AES67469.1| Beta-galactosidase [Medicago
           truncatula]
          Length = 2260

 Score =  174 bits (442), Expect = 5e-42
 Identities = 82/121 (67%), Positives = 97/121 (80%), Gaps = 2/121 (1%)
 Frame = +2

Query: 32  NDSADMSNL--YMKEMSSLITPERLDGTNYIEWSLNAQNKIRGRKRWGFISGTKAAPTNI 205
           +DSA  SN   +  +M S +TPERLDGTNY EW+LNA+NKIRGRK WG+ISG K  P   
Sbjct: 519 SDSAQKSNSAPHTHDMYSSLTPERLDGTNYTEWALNAENKIRGRKHWGYISGKKVTPATK 578

Query: 206 NSEEYEAWEDENCLVKSWLLDAMTKDIRSIFLCLSTAKEIWNTAKQTYSVNQDASKDYQL 385
            S+EYE WEDENCLVKSWLLDAMTKD+RS+F+ L TAK+IW + K+TYSV+QDASK YQL
Sbjct: 579 TSDEYETWEDENCLVKSWLLDAMTKDVRSLFIRLPTAKKIWESVKETYSVSQDASKAYQL 638

Query: 386 Y 388
           Y
Sbjct: 639 Y 639


>emb|CBI24723.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/128 (38%), Positives = 77/128 (60%)
 Frame = +2

Query: 2   SNDSVVVYSNNDSADMSNLYMKEMSSLITPERLDGTNYIEWSLNAQNKIRGRKRWGFISG 181
           S   +++ S++ S  M   ++      IT  +L+G NY++WS +    IRG+++  +I+G
Sbjct: 17  STSDIIISSSSSSHQMETSHLP-----ITAHKLNGQNYLQWSQSILMFIRGKEKDDYITG 71

Query: 182 TKAAPTNINSEEYEAWEDENCLVKSWLLDAMTKDIRSIFLCLSTAKEIWNTAKQTYSVNQ 361
             AAP    S  Y+ W  EN +V SWL+++MT DI   FL   TAKEIWNTAK+T+S  +
Sbjct: 72  ASAAPETTAST-YKKWIAENNMVMSWLVNSMTADIGENFLSFDTAKEIWNTAKETFSDKE 130

Query: 362 DASKDYQL 385
           + S+  Q+
Sbjct: 131 NTSEIIQI 138


>emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]
          Length = 1636

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/128 (37%), Positives = 77/128 (60%)
 Frame = +2

Query: 2   SNDSVVVYSNNDSADMSNLYMKEMSSLITPERLDGTNYIEWSLNAQNKIRGRKRWGFISG 181
           S   +++ S++ S  M   ++      IT  +L+G NY++WS +    IRG+++  +I+G
Sbjct: 17  STSDIIISSSSSSHQMETSHLP-----ITAHKLNGQNYLQWSQSILMFIRGKEKDDYITG 71

Query: 182 TKAAPTNINSEEYEAWEDENCLVKSWLLDAMTKDIRSIFLCLSTAKEIWNTAKQTYSVNQ 361
             AAP    S  Y+ W  EN +V SWL+++MT DI   FL   TAKEIW+TAK+T+S  +
Sbjct: 72  ASAAPETTAST-YKKWIAENNMVMSWLVNSMTADIGENFLSFDTAKEIWDTAKETFSDKE 130

Query: 362 DASKDYQL 385
           + S+  Q+
Sbjct: 131 NTSEIIQI 138


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