BLASTX nr result

ID: Coptis21_contig00037417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037417
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like...   118   4e-25
ref|XP_002524078.1| ring finger protein, putative [Ricinus commu...   117   7e-25
ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A...   112   3e-23
ref|XP_003520719.1| PREDICTED: RING-H2 finger protein ATL70-like...   112   3e-23
emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera]   111   7e-23

>ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like [Vitis vinifera]
          Length = 169

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/74 (71%), Positives = 61/74 (82%)
 Frame = -2

Query: 302 RNKDTSASCCSICLADYKGNDMLRLLPDCGHLFHLKCVDPWLRKHPTCPVCRXXXXXXXX 123
           ++KD++A+CCSICLADYKG+DMLRLLPDCGHLFHLKCVDPWLR HPTCPVCR        
Sbjct: 95  QHKDSTAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPMPTPL 154

Query: 122 XXXLAEVVSLASQR 81
              LAEVV LA++R
Sbjct: 155 STPLAEVVPLATRR 168


>ref|XP_002524078.1| ring finger protein, putative [Ricinus communis]
           gi|223536646|gb|EEF38288.1| ring finger protein,
           putative [Ricinus communis]
          Length = 172

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/73 (73%), Positives = 57/73 (78%)
 Frame = -2

Query: 299 NKDTSASCCSICLADYKGNDMLRLLPDCGHLFHLKCVDPWLRKHPTCPVCRXXXXXXXXX 120
           N DT+A+CCSICLADYK  DMLRLLPDCGHLFHLKCVDPWLR HPTCPVCR         
Sbjct: 99  NTDTTATCCSICLADYKSTDMLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRNSPLPTPLS 158

Query: 119 XXLAEVVSLASQR 81
             LAEVV LAS+R
Sbjct: 159 TPLAEVVPLASRR 171


>ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
           sativus]
          Length = 172

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/74 (68%), Positives = 57/74 (77%)
 Frame = -2

Query: 302 RNKDTSASCCSICLADYKGNDMLRLLPDCGHLFHLKCVDPWLRKHPTCPVCRXXXXXXXX 123
           +  D++ASCCSICLADYK +D+LRLLPDCGHLFHLKCVDPWLR HPTCPVCR        
Sbjct: 98  QKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPL 157

Query: 122 XXXLAEVVSLASQR 81
              LAE V LAS+R
Sbjct: 158 STPLAEQVPLASRR 171


>ref|XP_003520719.1| PREDICTED: RING-H2 finger protein ATL70-like [Glycine max]
          Length = 171

 Score =  112 bits (280), Expect = 3e-23
 Identities = 49/74 (66%), Positives = 57/74 (77%)
 Frame = -2

Query: 302 RNKDTSASCCSICLADYKGNDMLRLLPDCGHLFHLKCVDPWLRKHPTCPVCRXXXXXXXX 123
           +  D++A+CCSICLADYKG DMLR+LPDCGH FHLKC+DPWLR HPTCPVCR        
Sbjct: 96  KKSDSTATCCSICLADYKGTDMLRMLPDCGHQFHLKCIDPWLRLHPTCPVCRTSPIPTPL 155

Query: 122 XXXLAEVVSLASQR 81
              LAEVV LAS++
Sbjct: 156 STPLAEVVPLASRQ 169


>emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera]
          Length = 275

 Score =  111 bits (277), Expect = 7e-23
 Identities = 45/52 (86%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 RNKDTSASCCSICLADYKGNDMLRLLPDCGHLFHLKCVDPWLRKHPTCPVCR 147
           ++KD++A+CCSICLADYKG+DMLRLLPDCGHLFHLKCVDPWLR HPTCPVCR
Sbjct: 94  QHKDSTAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDPWLRLHPTCPVCR 145


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