BLASTX nr result

ID: Coptis21_contig00037402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037402
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519583.1| Vacuolar protein sorting protein, putative [...    75   2e-20
dbj|BAK01558.1| predicted protein [Hordeum vulgare subsp. vulgar...    71   1e-19
ref|XP_002307938.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-19
gb|AFW88116.1| hypothetical protein ZEAMMB73_992288 [Zea mays]         69   7e-19
gb|AFW88114.1| hypothetical protein ZEAMMB73_992288 [Zea mays]         69   7e-19

>ref|XP_002519583.1| Vacuolar protein sorting protein, putative [Ricinus communis]
           gi|223541241|gb|EEF42794.1| Vacuolar protein sorting
           protein, putative [Ricinus communis]
          Length = 713

 Score = 75.1 bits (183), Expect(2) = 2e-20
 Identities = 34/38 (89%), Positives = 37/38 (97%)
 Frame = +3

Query: 3   HPHYVMRRYAEFTASLIHLSFEYGDGQLELNLERLRIS 116
           HPHYVMRRYAEFTASLIHL+ EYGDGQLELNLERLR++
Sbjct: 497 HPHYVMRRYAEFTASLIHLNVEYGDGQLELNLERLRMA 534



 Score = 48.9 bits (115), Expect(2) = 2e-20
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = +2

Query: 125 DLLNRLTEMFQKPKLRMVFLINNCCMIVSVIKEVVMEGGKTLL 253
           DLL +L + F KPKL++VFLINN  M +SV+KE   EGGK  L
Sbjct: 537 DLLIKLAKTFTKPKLQIVFLINNYDMTISVLKEAGPEGGKIQL 579


>dbj|BAK01558.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326516658|dbj|BAJ92484.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 701

 Score = 71.2 bits (173), Expect(2) = 1e-19
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = +3

Query: 3   HPHYVMRRYAEFTASLIHLSFEYGDGQLELNLERLRIS 116
           HPHYV RRYAEFTASL+HL+ EYGDGQL+LNLERLR++
Sbjct: 486 HPHYVTRRYAEFTASLVHLNVEYGDGQLDLNLERLRMA 523



 Score = 50.1 bits (118), Expect(2) = 1e-19
 Identities = 24/43 (55%), Positives = 32/43 (74%)
 Frame = +2

Query: 125 DLLNRLTEMFQKPKLRMVFLINNCCMIVSVIKEVVMEGGKTLL 253
           DLL +L +MF KPK++ VFLINN  + ++V+KE   EGGKT L
Sbjct: 526 DLLVKLAKMFPKPKMQTVFLINNYDLTIAVLKEAGTEGGKTQL 568


>ref|XP_002307938.1| predicted protein [Populus trichocarpa] gi|222853914|gb|EEE91461.1|
           predicted protein [Populus trichocarpa]
          Length = 718

 Score = 74.3 bits (181), Expect(2) = 3e-19
 Identities = 33/38 (86%), Positives = 37/38 (97%)
 Frame = +3

Query: 3   HPHYVMRRYAEFTASLIHLSFEYGDGQLELNLERLRIS 116
           HPHYVMRRYAEFTASLIHL+ EYGDGQLELN+ERLR++
Sbjct: 502 HPHYVMRRYAEFTASLIHLNVEYGDGQLELNMERLRMA 539



 Score = 45.8 bits (107), Expect(2) = 3e-19
 Identities = 23/43 (53%), Positives = 30/43 (69%)
 Frame = +2

Query: 125 DLLNRLTEMFQKPKLRMVFLINNCCMIVSVIKEVVMEGGKTLL 253
           DLL +L + F KPK ++VFLINN  M ++V+KE   EGGK  L
Sbjct: 542 DLLMKLAKTFPKPKPQIVFLINNYDMTIAVLKEAGSEGGKIQL 584


>gb|AFW88116.1| hypothetical protein ZEAMMB73_992288 [Zea mays]
          Length = 700

 Score = 69.3 bits (168), Expect(2) = 7e-19
 Identities = 30/38 (78%), Positives = 36/38 (94%)
 Frame = +3

Query: 3   HPHYVMRRYAEFTASLIHLSFEYGDGQLELNLERLRIS 116
           HPHYV RRYAEFTASL+HL+ E+GDGQL+LNLERLR++
Sbjct: 485 HPHYVTRRYAEFTASLVHLNVEHGDGQLDLNLERLRMA 522



 Score = 49.3 bits (116), Expect(2) = 7e-19
 Identities = 23/40 (57%), Positives = 30/40 (75%)
 Frame = +2

Query: 125 DLLNRLTEMFQKPKLRMVFLINNCCMIVSVIKEVVMEGGK 244
           DLL +L +MF KPKL+ VFLINN  + +S++KE   EGGK
Sbjct: 525 DLLVKLAKMFSKPKLQTVFLINNYDLTISILKEAGTEGGK 564


>gb|AFW88114.1| hypothetical protein ZEAMMB73_992288 [Zea mays]
          Length = 590

 Score = 69.3 bits (168), Expect(2) = 7e-19
 Identities = 30/38 (78%), Positives = 36/38 (94%)
 Frame = +3

Query: 3   HPHYVMRRYAEFTASLIHLSFEYGDGQLELNLERLRIS 116
           HPHYV RRYAEFTASL+HL+ E+GDGQL+LNLERLR++
Sbjct: 375 HPHYVTRRYAEFTASLVHLNVEHGDGQLDLNLERLRMA 412



 Score = 49.3 bits (116), Expect(2) = 7e-19
 Identities = 23/40 (57%), Positives = 30/40 (75%)
 Frame = +2

Query: 125 DLLNRLTEMFQKPKLRMVFLINNCCMIVSVIKEVVMEGGK 244
           DLL +L +MF KPKL+ VFLINN  + +S++KE   EGGK
Sbjct: 415 DLLVKLAKMFSKPKLQTVFLINNYDLTISILKEAGTEGGK 454


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