BLASTX nr result

ID: Coptis21_contig00037388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037388
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35029.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002465805.1| hypothetical protein SORBIDRAFT_01g046140 [S...    55   6e-06

>emb|CBI35029.3| unnamed protein product [Vitis vinifera]
          Length = 1596

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 13/114 (11%)
 Frame = +3

Query: 18   YLQVRMEELLHKDDTDKTETAREANLAQDSLDTKRSVNKGGNQSKPAQKKNNLDQKHDN- 194
            +++ R+E+L+ KD   K++ AREA LAQ +LD+++++++GG  +K  Q+K+   +K+ + 
Sbjct: 945  FVRARLEDLVDKDAIKKSDVAREALLAQLALDSEKNISRGGYNTKQMQRKSKDKKKNKSY 1004

Query: 195  --TMQLKTSVDNKRFLLVQ----------GSEEQVPPDVVSSTLDADKLKQTEE 320
                 LK S  N++ LL +            ++Q P   +   + A ++KQ EE
Sbjct: 1005 RKAKDLKASSGNEQLLLHEEDAKQAYFPDAFDDQNPNSKIGIPVSAAEIKQPEE 1058


>ref|XP_002465805.1| hypothetical protein SORBIDRAFT_01g046140 [Sorghum bicolor]
            gi|241919659|gb|EER92803.1| hypothetical protein
            SORBIDRAFT_01g046140 [Sorghum bicolor]
          Length = 1582

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
 Frame = +3

Query: 18   YLQVRMEELLHKDDTDKTETAREANLAQDSLDTKRSVNKGGNQSKPAQKKNNLDQKHDN- 194
            +LQ  +EEL+ KD  ++++ AREA LA+ +LD K++ NKGG+  +  +K  +  +  D+ 
Sbjct: 861  FLQSHLEELVDKDARERSDAAREAFLAELALDAKKNANKGGDMKQSHEKSKDKKKFKDSR 920

Query: 195  -TMQLKTSVDNKRFLLVQGSEEQVPPDVVSSTLDAD----KLKQTEEYYN 329
             + +LK S  + + L  Q S ++   +      D D    KL  +++Y N
Sbjct: 921  RSKELKDSSWSDQSLSRQDSADEETAETFQMLADCDDLDCKLSTSDDYLN 970