BLASTX nr result

ID: Coptis21_contig00037381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037381
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D...    72   8e-24
emb|CAN62994.1| hypothetical protein VITISV_021619 [Vitis vinifera]    72   9e-24
ref|XP_002892121.1| hypothetical protein ARALYDRAFT_887416 [Arab...    75   1e-23
ref|NP_171773.1| 1,4-beta-D-xylan synthase [Arabidopsis thaliana...    75   1e-23
ref|XP_003521583.1| PREDICTED: cellulose synthase-like protein D...    74   2e-22

>ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D5-like [Vitis vinifera]
          Length = 1171

 Score = 72.4 bits (176), Expect(2) = 8e-24
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = -3

Query: 477  FPQWSKLVGGVFFSFWVLCHLYPFAKGLMRRR 382
            FPQWSKLVGGVFFSFWVLCHLYPFAKGLM RR
Sbjct: 1100 FPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRR 1131



 Score = 62.8 bits (151), Expect(2) = 8e-24
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -1

Query: 368  TVVCVCSGLLSIVISLLWVYISPPSGRQDYMTLSFP 261
            T+V V SGLLSI+ISLLWVYISPPSGRQDYM   FP
Sbjct: 1136 TIVFVWSGLLSIIISLLWVYISPPSGRQDYMKFQFP 1171


>emb|CAN62994.1| hypothetical protein VITISV_021619 [Vitis vinifera]
          Length = 409

 Score = 72.4 bits (176), Expect(2) = 9e-24
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = -3

Query: 477 FPQWSKLVGGVFFSFWVLCHLYPFAKGLMRRR 382
           FPQWSKLVGGVFFSFWVLCHLYPFAKGLM RR
Sbjct: 338 FPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRR 369



 Score = 62.8 bits (151), Expect(2) = 9e-24
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -1

Query: 368 TVVCVCSGLLSIVISLLWVYISPPSGRQDYMTLSFP 261
           T+V V SGLLSI+ISLLWVYISPPSGRQDYM   FP
Sbjct: 374 TIVFVWSGLLSIIISLLWVYISPPSGRQDYMKFQFP 409


>ref|XP_002892121.1| hypothetical protein ARALYDRAFT_887416 [Arabidopsis lyrata subsp.
            lyrata] gi|297337963|gb|EFH68380.1| hypothetical protein
            ARALYDRAFT_887416 [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score = 74.7 bits (182), Expect(2) = 1e-23
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = -3

Query: 477  FPQWSKLVGGVFFSFWVLCHLYPFAKGLMRRRG 379
            FPQWSKLVGGVFFSFWVLCHLYPFAKGLM RRG
Sbjct: 1113 FPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRG 1145



 Score = 60.1 bits (144), Expect(2) = 1e-23
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = -1

Query: 368  TVVCVCSGLLSIVISLLWVYISPPSGRQDYMTLSFP 261
            T+V V SGLLSI++SLLWVYI+PPSG+QDYM   FP
Sbjct: 1149 TIVFVWSGLLSIIVSLLWVYINPPSGKQDYMQFQFP 1184


>ref|NP_171773.1| 1,4-beta-D-xylan synthase [Arabidopsis thaliana]
            gi|75207418|sp|Q9SRW9.1|CSLD5_ARATH RecName:
            Full=Cellulose synthase-like protein D5; Short=AtCslD5
            gi|6056428|gb|AAF02892.1|AC009525_26 Very similar to
            cellulose synthase catalytic subunit [Arabidopsis
            thaliana] gi|332189343|gb|AEE27464.1| 1,4-beta-D-xylan
            synthase [Arabidopsis thaliana]
          Length = 1181

 Score = 74.7 bits (182), Expect(2) = 1e-23
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = -3

Query: 477  FPQWSKLVGGVFFSFWVLCHLYPFAKGLMRRRG 379
            FPQWSKLVGGVFFSFWVLCHLYPFAKGLM RRG
Sbjct: 1110 FPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRG 1142



 Score = 60.1 bits (144), Expect(2) = 1e-23
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = -1

Query: 368  TVVCVCSGLLSIVISLLWVYISPPSGRQDYMTLSFP 261
            T+V V SGLLSI++SLLWVYI+PPSG+QDYM   FP
Sbjct: 1146 TIVFVWSGLLSIIVSLLWVYINPPSGKQDYMQFQFP 1181


>ref|XP_003521583.1| PREDICTED: cellulose synthase-like protein D5-like [Glycine max]
          Length = 1151

 Score = 73.6 bits (179), Expect(2) = 2e-22
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -3

Query: 477  FPQWSKLVGGVFFSFWVLCHLYPFAKGLMRRRG 379
            FPQWS+LVGGVFFSFWVLCHLYPFAKGLM RRG
Sbjct: 1079 FPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRRG 1111



 Score = 57.0 bits (136), Expect(2) = 2e-22
 Identities = 27/37 (72%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
 Frame = -1

Query: 368  TVVCVCSGLLSIVISLLWVYISPPSGR-QDYMTLSFP 261
            T++ V SGLLSI+ISLLWVYI+PPSGR QDYM   FP
Sbjct: 1115 TIIYVWSGLLSIIISLLWVYINPPSGRTQDYMNFQFP 1151


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