BLASTX nr result

ID: Coptis21_contig00037380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037380
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE41106.1| AP2 domain class transcription factor [Malus x do...    93   3e-17
ref|XP_002513597.1| Ethylene-responsive transcription factor, pu...    92   5e-17
ref|XP_002331847.1| AP2/ERF domain-containing transcription fact...    86   3e-15
ref|XP_002267400.1| PREDICTED: ethylene-responsive transcription...    80   2e-13
ref|XP_002317743.1| AP2/ERF domain-containing transcription fact...    79   7e-13

>gb|ADE41106.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 353

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 47/80 (58%), Positives = 63/80 (78%)
 Frame = -1

Query: 287 METSFYPPIKYTEHKNITKKLIKPAVKRSPITDSSSLSSKRVVRFSVTDNNATDSSSDEE 108
           ME+S   PIKY+EH++ TKKL+KP  K +  ++S+S  + R+VR SVTD +ATDSSSDEE
Sbjct: 1   MESSILCPIKYSEHRSTTKKLMKPRKKAT--SESASTVTPRIVRISVTDPDATDSSSDEE 58

Query: 107 DEFFTRHRVKRYINEIDIES 48
           +EFF R RVK Y+NEI+IE+
Sbjct: 59  EEFFGRQRVKHYVNEINIET 78


>ref|XP_002513597.1| Ethylene-responsive transcription factor, putative [Ricinus
           communis] gi|223547505|gb|EEF49000.1|
           Ethylene-responsive transcription factor, putative
           [Ricinus communis]
          Length = 309

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 52/94 (55%), Positives = 66/94 (70%), Gaps = 7/94 (7%)
 Frame = -1

Query: 287 METSFYPPIKYTEHKNITKKLIKPAVK-RSPITDSSSLSS-----KRVVRFSVTDNNATD 126
           ++ S   P+K+TEHK ITKK  KP++K + P +D  S         RVVR SVTD +ATD
Sbjct: 2   LDQSILCPMKFTEHKRITKKYTKPSLKPKKPSSDERSSCRLEHIPPRVVRISVTDPDATD 61

Query: 125 SSSDEEDEFFTRHRVKRYINEIDIE-SSTLQTNI 27
           SSSDEEDE F+R RVKRY+NEI IE +ST +TN+
Sbjct: 62  SSSDEEDELFSRQRVKRYVNEISIEAASTKETNL 95


>ref|XP_002331847.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222875085|gb|EEF12216.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 363

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 47/93 (50%), Positives = 62/93 (66%), Gaps = 7/93 (7%)
 Frame = -1

Query: 287 METSFYPPIKYTEHKNITKKLIKPAVK--RSPITDSSSL-----SSKRVVRFSVTDNNAT 129
           ++ S   PIKYTEHK +TK+  KP++K  + P  D   L        R+VR +VTD++AT
Sbjct: 2   IDQSILCPIKYTEHKKVTKQFTKPSLKPKKLPSDDRCRLLEPSNPQPRLVRVTVTDHDAT 61

Query: 128 DSSSDEEDEFFTRHRVKRYINEIDIESSTLQTN 30
           DSSSDEE   F R RVKRY+NEIDI++S  +TN
Sbjct: 62  DSSSDEEGGLFGRQRVKRYVNEIDIQASCKETN 94


>ref|XP_002267400.1| PREDICTED: ethylene-responsive transcription factor CRF4 [Vitis
           vinifera] gi|147838098|emb|CAN74147.1| hypothetical
           protein VITISV_018946 [Vitis vinifera]
          Length = 341

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 45/78 (57%), Positives = 55/78 (70%)
 Frame = -1

Query: 287 METSFYPPIKYTEHKNITKKLIKPAVKRSPITDSSSLSSKRVVRFSVTDNNATDSSSDEE 108
           M+ S   PIKYTEH++IT K  + +  R P   +S +   RVVR SVTD +ATDSSSDEE
Sbjct: 1   MDQSLLYPIKYTEHRSITNKQTRQS--RRPPEQNSGVP--RVVRISVTDPDATDSSSDEE 56

Query: 107 DEFFTRHRVKRYINEIDI 54
           DE F+R RVKRY NEI+I
Sbjct: 57  DELFSRQRVKRYTNEINI 74


>ref|XP_002317743.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222858416|gb|EEE95963.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 365

 Score = 78.6 bits (192), Expect = 7e-13
 Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 9/96 (9%)
 Frame = -1

Query: 287 METSFYPPIKYTEHKNITKKLIKPAVKRSPI-------TDSSSLSSKRVVRFSVTDNNAT 129
           ++ S   PIKYTEHK +TKK  K  +K + +       +   S  + R+VR +VTD++AT
Sbjct: 2   IDQSILCPIKYTEHKKVTKKFTKQPLKPNMVHSDDRCRSPEPSNPAPRLVRVTVTDHDAT 61

Query: 128 DSSSDEEDEFFTRHRVKRYINEIDIESSTL--QTNI 27
           DSSSDEE E F R RVKRY++EI+I+ +    +TN+
Sbjct: 62  DSSSDEEGELFGRQRVKRYVSEINIQPAAFCKETNV 97


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