BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037355
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94787.1| unknown [Populus trichocarpa]                          143   2e-32
ref|XP_004134378.1| PREDICTED: putative F-box protein PP2-B12-li...   142   2e-32
ref|XP_004166316.1| PREDICTED: putative F-box protein PP2-B12-li...   137   7e-31
ref|XP_004157667.1| PREDICTED: putative F-box protein PP2-B12-li...   134   1e-29
ref|XP_004134006.1| PREDICTED: putative F-box protein PP2-B12-li...   134   1e-29

>gb|ABK94787.1| unknown [Populus trichocarpa]
          Length = 267

 Score =  143 bits (360), Expect = 2e-32
 Identities = 75/145 (51%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   KKCFMIGARKLHIAWGDTPDYWTWTHEPD-SRFAEVAELVYVWWLEIRGKIDTRMLSPKT 178
           KKC+MIGAR L I WGDTPDYWTW   PD SRF+EVAEL YVWWL++RG+ID ++ SPKT
Sbjct: 101 KKCYMIGARGLSITWGDTPDYWTWKPLPDQSRFSEVAELRYVWWLDVRGRIDAKIFSPKT 160

Query: 179 TYGAYLVFKIKDSEFGGYNQWPPADVSVKFVEGGSGASDDQIAYLDPTQRPVNAPNGEVP 358
           TY AYLVFK+ DS  G   +    ++SV F E  S   +    +LD    P +     +P
Sbjct: 161 TYAAYLVFKLTDSTRGFDERL--VELSVNFEE--SVGEEKLHVFLDV---PPDYDMPPLP 213

Query: 359 SMRRDGWMEIKLGQLYNDHGEDGEV 433
             R DGWMEI++G+ + D+ +DG V
Sbjct: 214 RERSDGWMEIEMGEFFYDNEDDGSV 238


>ref|XP_004134378.1| PREDICTED: putative F-box protein PP2-B12-like [Cucumis sativus]
          Length = 267

 Score =  142 bits (359), Expect = 2e-32
 Identities = 74/151 (49%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
 Frame = +2

Query: 2   KKCFMIGARKLHIAWGDTPDYWTWTHEPDSRFAEVAELVYVWWLEIRGKIDTRMLSPKTT 181
           KKC+MIGAR L I WG +P YWTW   P SRF+EVAEL YVWWLEI+GKI+ R LSPKT 
Sbjct: 101 KKCYMIGARDLEIVWGSSPAYWTWQSIPTSRFSEVAELQYVWWLEIKGKIEGRNLSPKTK 160

Query: 182 YGAYLVFKIKDSEF--GGYNQWPPADVSVKFVEGGSGASDDQIAYLDPTQRPVNAPNGEV 355
           Y AY VFK K+ +F   G+    P  + V F     G    ++  LDP   P  +P   V
Sbjct: 161 YAAYFVFKFKEGDFQHDGFGT-KPVSLEVYFEGEEVGEDGTKMVLLDP---PEGSP--VV 214

Query: 356 PSMRRDGWMEIKLGQLYNDHGEDGEVEVSLM 448
              R DGWME+++G+ +N+ G+DG +   LM
Sbjct: 215 CKERSDGWMEVEMGEFFNELGDDGIIIFHLM 245


>ref|XP_004166316.1| PREDICTED: putative F-box protein PP2-B12-like [Cucumis sativus]
          Length = 267

 Score =  137 bits (346), Expect = 7e-31
 Identities = 72/151 (47%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
 Frame = +2

Query: 2   KKCFMIGARKLHIAWGDTPDYWTWTHEPDSRFAEVAELVYVWWLEIRGKIDTRMLSPKTT 181
           KKC+MIGAR L I WG +P+YWTW   P SRF+EVAEL YVWWLEI+GKI+ R LSPKT 
Sbjct: 101 KKCYMIGARDLEIVWGSSPEYWTWQSIPTSRFSEVAELQYVWWLEIKGKIEGRNLSPKTK 160

Query: 182 YGAYLVFKIKDSEFGGY-NQWPPADVSVKFVEGGSGASD-DQIAYLDPTQRPVNAPNGEV 355
           Y AY VFK+ +  F  +  +  P  + V F EG     D  +   LDP +      +  V
Sbjct: 161 YAAYFVFKLVEDNFCRHVFETTPVSLEVHF-EGAEVEEDRRKRVILDPLE-----GSSVV 214

Query: 356 PSMRRDGWMEIKLGQLYNDHGEDGEVEVSLM 448
              R DGWME+++G+ +N+ G+DG +   LM
Sbjct: 215 CVERSDGWMEVEMGEFFNECGDDGSIIFHLM 245


>ref|XP_004157667.1| PREDICTED: putative F-box protein PP2-B12-like [Cucumis sativus]
          Length = 268

 Score =  134 bits (336), Expect = 1e-29
 Identities = 72/149 (48%), Positives = 92/149 (61%), Gaps = 5/149 (3%)
 Frame = +2

Query: 2   KKCFMIGARKLHIAWGDTPDYWTWTHEPDSRFAEVAELVYVWWLEIRGKIDTRMLSPKTT 181
           KKC+MIGAR L I WG++P YWTW   P SRF EVAEL  VWWLEI+GKI+ R LSPKT 
Sbjct: 101 KKCYMIGARDLDIIWGNSPQYWTWKSIPTSRFREVAELQVVWWLEIKGKIEARSLSPKTK 160

Query: 182 YGAYLVFKIKDSEFG--GYNQWPPADVSVKFVEGGSGASDD-QIAYLDPTQRPVNAPNGE 352
           Y AY VFK+ +  +   G+ Q  P  + V F EG     D  +   LDP       P G 
Sbjct: 161 YAAYFVFKLVEDRYSRRGF-QIRPVSLEVHF-EGAEVEEDGRKRVILDP-------PEGS 211

Query: 353 --VPSMRRDGWMEIKLGQLYNDHGEDGEV 433
             V   R DGWME+++G+++N+ G+DG +
Sbjct: 212 LVVCEERSDGWMEVEMGEIFNELGDDGTI 240


>ref|XP_004134006.1| PREDICTED: putative F-box protein PP2-B12-like [Cucumis sativus]
          Length = 268

 Score =  134 bits (336), Expect = 1e-29
 Identities = 72/149 (48%), Positives = 92/149 (61%), Gaps = 5/149 (3%)
 Frame = +2

Query: 2   KKCFMIGARKLHIAWGDTPDYWTWTHEPDSRFAEVAELVYVWWLEIRGKIDTRMLSPKTT 181
           KKC+MIGAR L I WG++P YWTW   P SRF EVAEL  VWWLEI+GKI+ R LSPKT 
Sbjct: 101 KKCYMIGARDLDIIWGNSPQYWTWKSIPTSRFREVAELQVVWWLEIKGKIEARSLSPKTK 160

Query: 182 YGAYLVFKIKDSEFG--GYNQWPPADVSVKFVEGGSGASDD-QIAYLDPTQRPVNAPNGE 352
           Y AY VFK+ +  +   G+ Q  P  + V F EG     D  +   LDP       P G 
Sbjct: 161 YAAYFVFKLVEDRYSRRGF-QIRPVSLEVHF-EGAEVEEDGRKRVILDP-------PEGS 211

Query: 353 --VPSMRRDGWMEIKLGQLYNDHGEDGEV 433
             V   R DGWME+++G+++N+ G+DG +
Sbjct: 212 LVVCEERSDGWMEVEMGEIFNELGDDGTI 240