BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037353
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    60   2e-07
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                59   3e-07
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    59   4e-07
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    58   7e-07

>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
 Frame = -2

Query: 272 EEGGLGITDLYKWNKASYCGLVYKVAAKEDTMXXXXXXXXXXXKNFFWTMQIPTDC-SWV 96
           +EGGLG+  L + NK S   L++++ + +D++           K  FW++   +   SW+
Sbjct: 591 KEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWI 650

Query: 95  WRHVLKTRKLAVKFTRVRIANGKNTLLWHD 6
           WR +LK R++A  F ++ + NG NT  W D
Sbjct: 651 WRRLLKHREVAKSFCKIEVNNGVNTSFWFD 680


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = -2

Query: 269 EGGLGITDLYKWNKASYCGLVYKVAAKEDTMXXXXXXXXXXXKNFFWTMQIPTDC-SWVW 93
           EGGLG+ +L + N  S   LV+++ +  +++           K   W+++  T   SW+W
Sbjct: 518 EGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIW 577

Query: 92  RHVLKTRKLAVKFTRVRIANGKNTLLWHD 6
           R +LK R +A  F+RV + NG++   W+D
Sbjct: 578 RKILKIRDVAKSFSRVEVGNGESASFWYD 606


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/88 (29%), Positives = 44/88 (50%)
 Frame = -2

Query: 269  EGGLGITDLYKWNKASYCGLVYKVAAKEDTMXXXXXXXXXXXKNFFWTMQIPTDCSWVWR 90
            EGGLG+ + + WNK     L++ + A+ D++              FW  +  +  SW+W+
Sbjct: 863  EGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLRHVNFWNAEAASHHSWIWK 922

Query: 89   HVLKTRKLAVKFTRVRIANGKNTLLWHD 6
             +L  R LA +F R  + NG+    W+D
Sbjct: 923  AILGLRPLAKRFLRGAVGNGQLLSYWYD 950


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
 Frame = -2

Query: 272 EEGGLGITDLYKWNKASYCGLVYKVAAKED-TMXXXXXXXXXXXKNFFWTMQIPTDCSWV 96
           +EGGLGI  + +WNK +    ++ +    D ++              FWT++ P +CSW 
Sbjct: 157 KEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWA 216

Query: 95  WRHVLKTRKLAVKFTRVRIANGKNTLLWHD 6
           W  +LK R LA    +  I +G  T LW D
Sbjct: 217 WGKILKLRSLAWPKMKYIIGDGMTTSLWFD 246


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
 Frame = -2

Query: 272  EEGGLGITDLYKWNKASYCGLVYKVAAKEDTMXXXXXXXXXXXKNFFWTMQIPTDC-SWV 96
            EEGGLG+  L + N+ S   L++++ +  D++           K  FW+++  T   SW+
Sbjct: 1017 EEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTGLGSWL 1076

Query: 95   WRHVLKTRKLAVKFTRVRIANGKNTLLWHD 6
            WR +LK R  A  F R+ + +G  T  WHD
Sbjct: 1077 WRKILKQRDKARLFHRMEVRSGTFTSFWHD 1106