BLASTX nr result

ID: Coptis21_contig00037338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037338
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510601.1| tetracycline transporter, putative [Ricinus ...   149   3e-34
ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1...   142   2e-32
emb|CAN64703.1| hypothetical protein VITISV_038996 [Vitis vinifera]   142   2e-32
ref|XP_003523261.1| PREDICTED: hippocampus abundant transcript-l...   139   2e-31
gb|ABK95031.1| unknown [Populus trichocarpa]                          139   3e-31

>ref|XP_002510601.1| tetracycline transporter, putative [Ricinus communis]
           gi|223551302|gb|EEF52788.1| tetracycline transporter,
           putative [Ricinus communis]
          Length = 442

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/99 (73%), Positives = 88/99 (88%)
 Frame = +2

Query: 29  EFSGLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQALVQVTGA 208
           + SGL HLF+T+FL++FSTFMVIP+ITDVTMSALCPG++ECSLAIYL+GFQQA++   G 
Sbjct: 3   KLSGLSHLFMTIFLHNFSTFMVIPAITDVTMSALCPGRDECSLAIYLTGFQQAII---GL 59

Query: 209 GSLVMMPVVGNLSDVYGRKALLTIPMALTVVPLGTFNQS 325
           G+LVMMP+VGNLSD YGRKALLTIPM+LTV+PL T   S
Sbjct: 60  GTLVMMPLVGNLSDKYGRKALLTIPMSLTVIPLATLAYS 98


>ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1 protein [Vitis
           vinifera] gi|302141709|emb|CBI18912.3| unnamed protein
           product [Vitis vinifera]
          Length = 442

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/93 (72%), Positives = 85/93 (91%)
 Frame = +2

Query: 29  EFSGLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQALVQVTGA 208
           + SGL HLF+TVFL++F+TFMVIP+ITDVTM+ALCPG++ECS+AIYL+GFQQ ++   G 
Sbjct: 3   KLSGLRHLFMTVFLFNFATFMVIPAITDVTMAALCPGRDECSIAIYLTGFQQVII---GL 59

Query: 209 GSLVMMPVVGNLSDVYGRKALLTIPMALTVVPL 307
           G+LVMMP+VGNLSD+YGRKALLTIPM LT++PL
Sbjct: 60  GTLVMMPLVGNLSDMYGRKALLTIPMCLTIIPL 92


>emb|CAN64703.1| hypothetical protein VITISV_038996 [Vitis vinifera]
          Length = 408

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/93 (72%), Positives = 85/93 (91%)
 Frame = +2

Query: 29  EFSGLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQALVQVTGA 208
           + SGL HLF+TVFL++F+TFMVIP+ITDVTM+ALCPG++ECS+AIYL+GFQQ ++   G 
Sbjct: 3   KLSGLRHLFMTVFLFNFATFMVIPAITDVTMAALCPGRDECSIAIYLTGFQQVII---GL 59

Query: 209 GSLVMMPVVGNLSDVYGRKALLTIPMALTVVPL 307
           G+LVMMP+VGNLSD+YGRKALLTIPM LT++PL
Sbjct: 60  GTLVMMPLVGNLSDMYGRKALLTIPMCLTIIPL 92


>ref|XP_003523261.1| PREDICTED: hippocampus abundant transcript-like protein 1-like
           [Glycine max]
          Length = 432

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/91 (70%), Positives = 83/91 (91%)
 Frame = +2

Query: 38  GLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQALVQVTGAGSL 217
           GL HLF+TVFL++FS FMV+P+ITDVTM+ALCPGQ+ECSLAIY++GFQQA++   G G+L
Sbjct: 6   GLSHLFMTVFLHNFSMFMVVPAITDVTMAALCPGQDECSLAIYITGFQQAMI---GLGTL 62

Query: 218 VMMPVVGNLSDVYGRKALLTIPMALTVVPLG 310
           VMMP++GNLSD YGRKA+LT+PM LT++P+G
Sbjct: 63  VMMPLLGNLSDKYGRKAILTLPMILTIIPVG 93


>gb|ABK95031.1| unknown [Populus trichocarpa]
          Length = 450

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/92 (70%), Positives = 83/92 (90%)
 Frame = +2

Query: 29  EFSGLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQALVQVTGA 208
           + SGL HLF+T+FL++FSTFMVIP+ITDVTMSALCPG++ECSLAIYL+GFQQA++   G 
Sbjct: 3   KLSGLSHLFMTIFLHNFSTFMVIPAITDVTMSALCPGRDECSLAIYLTGFQQAII---GL 59

Query: 209 GSLVMMPVVGNLSDVYGRKALLTIPMALTVVP 304
           G+LV MP++GN+SD YGRKALLT+PM+L +VP
Sbjct: 60  GTLVTMPLIGNMSDKYGRKALLTVPMSLIIVP 91


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