BLASTX nr result
ID: Coptis21_contig00037338
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00037338 (393 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002510601.1| tetracycline transporter, putative [Ricinus ... 149 3e-34 ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1... 142 2e-32 emb|CAN64703.1| hypothetical protein VITISV_038996 [Vitis vinifera] 142 2e-32 ref|XP_003523261.1| PREDICTED: hippocampus abundant transcript-l... 139 2e-31 gb|ABK95031.1| unknown [Populus trichocarpa] 139 3e-31 >ref|XP_002510601.1| tetracycline transporter, putative [Ricinus communis] gi|223551302|gb|EEF52788.1| tetracycline transporter, putative [Ricinus communis] Length = 442 Score = 149 bits (375), Expect = 3e-34 Identities = 73/99 (73%), Positives = 88/99 (88%) Frame = +2 Query: 29 EFSGLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQALVQVTGA 208 + SGL HLF+T+FL++FSTFMVIP+ITDVTMSALCPG++ECSLAIYL+GFQQA++ G Sbjct: 3 KLSGLSHLFMTIFLHNFSTFMVIPAITDVTMSALCPGRDECSLAIYLTGFQQAII---GL 59 Query: 209 GSLVMMPVVGNLSDVYGRKALLTIPMALTVVPLGTFNQS 325 G+LVMMP+VGNLSD YGRKALLTIPM+LTV+PL T S Sbjct: 60 GTLVMMPLVGNLSDKYGRKALLTIPMSLTVIPLATLAYS 98 >ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1 protein [Vitis vinifera] gi|302141709|emb|CBI18912.3| unnamed protein product [Vitis vinifera] Length = 442 Score = 142 bits (359), Expect = 2e-32 Identities = 67/93 (72%), Positives = 85/93 (91%) Frame = +2 Query: 29 EFSGLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQALVQVTGA 208 + SGL HLF+TVFL++F+TFMVIP+ITDVTM+ALCPG++ECS+AIYL+GFQQ ++ G Sbjct: 3 KLSGLRHLFMTVFLFNFATFMVIPAITDVTMAALCPGRDECSIAIYLTGFQQVII---GL 59 Query: 209 GSLVMMPVVGNLSDVYGRKALLTIPMALTVVPL 307 G+LVMMP+VGNLSD+YGRKALLTIPM LT++PL Sbjct: 60 GTLVMMPLVGNLSDMYGRKALLTIPMCLTIIPL 92 >emb|CAN64703.1| hypothetical protein VITISV_038996 [Vitis vinifera] Length = 408 Score = 142 bits (359), Expect = 2e-32 Identities = 67/93 (72%), Positives = 85/93 (91%) Frame = +2 Query: 29 EFSGLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQALVQVTGA 208 + SGL HLF+TVFL++F+TFMVIP+ITDVTM+ALCPG++ECS+AIYL+GFQQ ++ G Sbjct: 3 KLSGLRHLFMTVFLFNFATFMVIPAITDVTMAALCPGRDECSIAIYLTGFQQVII---GL 59 Query: 209 GSLVMMPVVGNLSDVYGRKALLTIPMALTVVPL 307 G+LVMMP+VGNLSD+YGRKALLTIPM LT++PL Sbjct: 60 GTLVMMPLVGNLSDMYGRKALLTIPMCLTIIPL 92 >ref|XP_003523261.1| PREDICTED: hippocampus abundant transcript-like protein 1-like [Glycine max] Length = 432 Score = 139 bits (350), Expect = 2e-31 Identities = 64/91 (70%), Positives = 83/91 (91%) Frame = +2 Query: 38 GLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQALVQVTGAGSL 217 GL HLF+TVFL++FS FMV+P+ITDVTM+ALCPGQ+ECSLAIY++GFQQA++ G G+L Sbjct: 6 GLSHLFMTVFLHNFSMFMVVPAITDVTMAALCPGQDECSLAIYITGFQQAMI---GLGTL 62 Query: 218 VMMPVVGNLSDVYGRKALLTIPMALTVVPLG 310 VMMP++GNLSD YGRKA+LT+PM LT++P+G Sbjct: 63 VMMPLLGNLSDKYGRKAILTLPMILTIIPVG 93 >gb|ABK95031.1| unknown [Populus trichocarpa] Length = 450 Score = 139 bits (349), Expect = 3e-31 Identities = 65/92 (70%), Positives = 83/92 (90%) Frame = +2 Query: 29 EFSGLVHLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQALVQVTGA 208 + SGL HLF+T+FL++FSTFMVIP+ITDVTMSALCPG++ECSLAIYL+GFQQA++ G Sbjct: 3 KLSGLSHLFMTIFLHNFSTFMVIPAITDVTMSALCPGRDECSLAIYLTGFQQAII---GL 59 Query: 209 GSLVMMPVVGNLSDVYGRKALLTIPMALTVVP 304 G+LV MP++GN+SD YGRKALLT+PM+L +VP Sbjct: 60 GTLVTMPLIGNMSDKYGRKALLTVPMSLIIVP 91