BLASTX nr result

ID: Coptis21_contig00037319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037319
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera]    59   5e-07
emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]    57   2e-06

>emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera]
          Length = 424

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/62 (40%), Positives = 38/62 (61%)
 Frame = -1

Query: 189 LSAPNVGHFLKLSGDNYITWLRQMEPFLYGHDFMKYVDGSHPTPPRTLPGSTEGTTIANP 10
           L+   + + +KL+  NY++W  QME  L G+D  K++DGSHP PP T+  +T      NP
Sbjct: 20  LTMITIHNSIKLTPTNYLSWKTQMEAILIGYDLQKFIDGSHPAPPTTI--TTNNVVFTNP 77

Query: 9   AF 4
           A+
Sbjct: 78  AY 79


>emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]
          Length = 1269

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/62 (40%), Positives = 37/62 (59%)
 Frame = -1

Query: 189 LSAPNVGHFLKLSGDNYITWLRQMEPFLYGHDFMKYVDGSHPTPPRTLPGSTEGTTIANP 10
           L+   + + +KL+  NY +W  QME  L G+D  K++DGSHP PP T+  +T      NP
Sbjct: 7   LTMITIHNSIKLTPTNYFSWKTQMEAILIGYDLQKFIDGSHPAPPTTI--TTNNVVSTNP 64

Query: 9   AF 4
           A+
Sbjct: 65  AY 66


Top