BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037292
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat...   134   8e-30
ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat...   130   1e-28
emb|CBI30310.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002309422.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
ref|XP_002882733.1| pentatricopeptide repeat-containing protein ...   117   1e-24

>ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Glycine max]
          Length = 630

 Score =  134 bits (337), Expect = 8e-30
 Identities = 61/79 (77%), Positives = 70/79 (88%)
 Frame = +1

Query: 4   TEDIISGTGVHSEKLAIAFALLNTEIGMEIVVMKNLRVCGDCHLFIKLVSKIVNREIIVR 183
           +E+++ GTGVHSEKLAIAFALLNT+ G EI VMKNLRVC DCHLFIKLVSKIVNR+ IVR
Sbjct: 552 SEELLIGTGVHSEKLAIAFALLNTKSGTEITVMKNLRVCVDCHLFIKLVSKIVNRQFIVR 611

Query: 184 DPSRFHQFKDGVCSCNDYW 240
           D +RFH F+DG+CSC DYW
Sbjct: 612 DATRFHHFRDGICSCKDYW 630


>ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  130 bits (326), Expect = 1e-28
 Identities = 57/78 (73%), Positives = 70/78 (89%)
 Frame = +1

Query: 7   EDIISGTGVHSEKLAIAFALLNTEIGMEIVVMKNLRVCGDCHLFIKLVSKIVNREIIVRD 186
           E++I+G GVHSEKLAIAF L+NTE G EI V+KNLRVCGDCHLF+KLVS+IV+R+++VRD
Sbjct: 552 EELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRD 611

Query: 187 PSRFHQFKDGVCSCNDYW 240
            +RFH FK+GVCSC DYW
Sbjct: 612 ATRFHHFKNGVCSCKDYW 629


>emb|CBI30310.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  130 bits (326), Expect = 1e-28
 Identities = 57/78 (73%), Positives = 70/78 (89%)
 Frame = +1

Query: 7   EDIISGTGVHSEKLAIAFALLNTEIGMEIVVMKNLRVCGDCHLFIKLVSKIVNREIIVRD 186
           E++I+G GVHSEKLAIAF L+NTE G EI V+KNLRVCGDCHLF+KLVS+IV+R+++VRD
Sbjct: 466 EELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRD 525

Query: 187 PSRFHQFKDGVCSCNDYW 240
            +RFH FK+GVCSC DYW
Sbjct: 526 ATRFHHFKNGVCSCKDYW 543


>ref|XP_002309422.1| predicted protein [Populus trichocarpa] gi|222855398|gb|EEE92945.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score =  121 bits (303), Expect = 7e-26
 Identities = 52/78 (66%), Positives = 66/78 (84%)
 Frame = +1

Query: 7   EDIISGTGVHSEKLAIAFALLNTEIGMEIVVMKNLRVCGDCHLFIKLVSKIVNREIIVRD 186
           E+ ++  GVHSEKLA+AFALLNT    EI+++KNLR+CGDCHLFIKLVSKIV+R+ +VRD
Sbjct: 505 EEYLNSMGVHSEKLAVAFALLNTRKETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRD 564

Query: 187 PSRFHQFKDGVCSCNDYW 240
            +RFH FK+G CSC +YW
Sbjct: 565 ATRFHHFKNGFCSCKEYW 582


>ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328573|gb|EFH58992.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 620

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/78 (69%), Positives = 64/78 (82%)
 Frame = +1

Query: 7   EDIISGTGVHSEKLAIAFALLNTEIGMEIVVMKNLRVCGDCHLFIKLVSKIVNREIIVRD 186
           E++ S T  HSE+LAIAF +LN+  G EI+V+KNLRVC DCH+FIKLVSKIV+R  +VRD
Sbjct: 543 EEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRD 602

Query: 187 PSRFHQFKDGVCSCNDYW 240
            SRFH FKDGVCSC DYW
Sbjct: 603 ASRFHYFKDGVCSCKDYW 620