BLASTX nr result

ID: Coptis21_contig00037291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037291
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256...   173   2e-41
emb|CBI16878.3| unnamed protein product [Vitis vinifera]              167   1e-39
gb|ABK94444.1| unknown [Populus trichocarpa]                          161   6e-38
ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35
ref|XP_002887108.1| zinc finger family protein [Arabidopsis lyra...   151   7e-35

>ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256612 [Vitis vinifera]
          Length = 503

 Score =  173 bits (438), Expect = 2e-41
 Identities = 85/159 (53%), Positives = 113/159 (71%), Gaps = 6/159 (3%)
 Frame = -2

Query: 544 ESKVVRGMESVIATVSGYHGSERFKLIKLINYTGASYVGAMTKSTTHLVCWEFKGRKYEL 365
           E   ++GMES+IATVSGYHG ER  LIKLI+ TGA YVG M++S THLVCW+F+GRKY L
Sbjct: 22  EESAIQGMESIIATVSGYHGVERSNLIKLISQTGAKYVGTMSRSITHLVCWKFEGRKYSL 81

Query: 364 AKSFGTKIVSHKWFEDCVEAGKRLPERHYMMKSGQQAGPILWEVPVAVDKKDDTLTRKRG 185
           AK F T IV+H+WFEDC++AGKRLPE  Y+++SGQ+ GP+  EVP+ V +K + LT+K G
Sbjct: 82  AKKFKTLIVNHRWFEDCIKAGKRLPENSYLLQSGQEVGPLSLEVPL-VSEKANPLTKKNG 140

Query: 184 NV------LCDMSNTCNGTRAVERNPESVWLDSRLLSEN 86
                    CD+S      +      ++VW+DS LL+E+
Sbjct: 141 RAHSVRGSACDISKELWVDKGWGGADDAVWIDSFLLNEH 179


>emb|CBI16878.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  167 bits (423), Expect = 1e-39
 Identities = 83/152 (54%), Positives = 109/152 (71%), Gaps = 6/152 (3%)
 Frame = -2

Query: 523 MESVIATVSGYHGSERFKLIKLINYTGASYVGAMTKSTTHLVCWEFKGRKYELAKSFGTK 344
           MES+IATVSGYHG ER  LIKLI+ TGA YVG M++S THLVCW+F+GRKY LAK F T 
Sbjct: 1   MESIIATVSGYHGVERSNLIKLISQTGAKYVGTMSRSITHLVCWKFEGRKYSLAKKFKTL 60

Query: 343 IVSHKWFEDCVEAGKRLPERHYMMKSGQQAGPILWEVPVAVDKKDDTLTRKRGNV----- 179
           IV+H+WFEDC++AGKRLPE  Y+++SGQ+ GP+  EVP+ V +K + LT+K G       
Sbjct: 61  IVNHRWFEDCIKAGKRLPENSYLLQSGQEVGPLSLEVPL-VSEKANPLTKKNGRAHSVRG 119

Query: 178 -LCDMSNTCNGTRAVERNPESVWLDSRLLSEN 86
             CD+S      +      ++VW+DS LL+E+
Sbjct: 120 SACDISKELWVDKGWGGADDAVWIDSFLLNEH 151


>gb|ABK94444.1| unknown [Populus trichocarpa]
          Length = 482

 Score =  161 bits (408), Expect = 6e-38
 Identities = 86/151 (56%), Positives = 112/151 (74%), Gaps = 6/151 (3%)
 Frame = -2

Query: 523 MESVIATVSGYHGSERFKLIKLINYTGASYVGAMTKSTTHLVCWEFKGRKYELAKSFGTK 344
           MESV+ATVSGYHGSERF LIKLI+ +GASYVGAM+ STTHLVCW+F+GRKYELA  F T 
Sbjct: 1   MESVVATVSGYHGSERFNLIKLISQSGASYVGAMSNSTTHLVCWKFEGRKYELASKFDTL 60

Query: 343 IVSHKWFEDCVEAGKRLPERHYMMKSGQQAGPILWEVPVAVDKKDDTLTRKRGNVLCDMS 164
           +V+H+W E+CV+ GKR+PE  YM++SGQ+ GP++ +VP  VDK   +L +KR   L D S
Sbjct: 61  VVNHRWVEECVKQGKRVPEYPYMLESGQEVGPLVLDVP-NVDKL-GSLNKKR-KPLSDKS 117

Query: 163 NTCNGT--RAVERNPE----SVWLDSRLLSE 89
           N C  +  R V+ + E    + W DS LL++
Sbjct: 118 NNCEDSERRIVDVDCEDSGLAAWSDSFLLND 148


>ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|222848934|gb|EEE86481.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  152 bits (385), Expect = 3e-35
 Identities = 73/112 (65%), Positives = 93/112 (83%)
 Frame = -2

Query: 523 MESVIATVSGYHGSERFKLIKLINYTGASYVGAMTKSTTHLVCWEFKGRKYELAKSFGTK 344
           MESV+ATVSGYHGSERF LIKLI+ +GASYVGAM+ STTHLVCW+F+GRKYELA  F T 
Sbjct: 1   MESVVATVSGYHGSERFNLIKLISQSGASYVGAMSNSTTHLVCWKFEGRKYELASKFDTL 60

Query: 343 IVSHKWFEDCVEAGKRLPERHYMMKSGQQAGPILWEVPVAVDKKDDTLTRKR 188
           +V+H+W E+CV+ GKR+PE  YM++SGQ+ GP++ +VP  VDK   +L +KR
Sbjct: 61  VVNHRWVEECVKQGKRVPEYPYMLESGQEVGPLVLDVP-NVDKL-GSLNKKR 110


>ref|XP_002887108.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332949|gb|EFH63367.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 464

 Score =  151 bits (382), Expect = 7e-35
 Identities = 72/146 (49%), Positives = 103/146 (70%), Gaps = 1/146 (0%)
 Frame = -2

Query: 523 MESVIATVSGYHGSERFKLIKLINYTGASYVGAMTKSTTHLVCWEFKGRKYELAKSFGTK 344
           ME+V+ATVSGYHGS+RFKLIKLI+++GASYVGAM++S THLVCW+F+G+KY+LAK FGT 
Sbjct: 1   MENVVATVSGYHGSDRFKLIKLISHSGASYVGAMSRSITHLVCWKFEGKKYDLAKKFGTV 60

Query: 343 IVSHKWFEDCVEAGKRLPERHYMMKSGQQAGPILWEVP-VAVDKKDDTLTRKRGNVLCDM 167
           +V+H+W E+CV  G+R+ E  YM +SG++ GP++ E+P V+ + K      K        
Sbjct: 61  VVNHQWVEECVREGRRVSETPYMFESGEEVGPLMVELPAVSGEAKVTKKVNKAAETFEKY 120

Query: 166 SNTCNGTRAVERNPESVWLDSRLLSE 89
            +     R+   +  + W+DS LL E
Sbjct: 121 FSKGEENRSGSTSELATWMDSVLLKE 146


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