BLASTX nr result

ID: Coptis21_contig00037274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037274
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320261.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
gb|AFP55551.1| mutator-like transposase [Rosa rugosa]                  64   2e-08
ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
emb|CAN82231.1| hypothetical protein VITISV_005121 [Vitis vinifera]    61   1e-07
ref|XP_002269076.1| PREDICTED: uncharacterized protein LOC100253...    61   1e-07

>ref|XP_002320261.1| predicted protein [Populus trichocarpa] gi|222861034|gb|EEE98576.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/120 (28%), Positives = 61/120 (50%)
 Frame = -2

Query: 368 HTCGFAFKDYNHPPLTSYLVMTHILDFARDKPFLSLGDITSFYSREYGLKISKHMSYTSK 189
           HTCG      +HP  +  +V   + +  RD P +   +I +   +E+G+++         
Sbjct: 79  HTCGAGTSTDSHPRASKKVVEGIVKEKLRDSPNVKPKEIANQIQQEFGIELRYSQVRRWM 138

Query: 188 KLALAELYGDVALSYNELLWYTKELKRRDPGNCVDLQVNEESGKFERVFIAFESSINGFK 9
           + A  E+ G    +YN+L W  +++   +PG  V L   E+   F R+FIAF +S++GF+
Sbjct: 139 EAATEEIQGSYKEAYNQLPWLCEKIVETNPGTAVSLNTREDL-SFHRLFIAFHASLHGFQ 197


>gb|AFP55551.1| mutator-like transposase [Rosa rugosa]
          Length = 721

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/122 (26%), Positives = 65/122 (53%)
 Frame = -2

Query: 368 HTCGFAFKDYNHPPLTSYLVMTHILDFARDKPFLSLGDITSFYSREYGLKISKHMSYTSK 189
           HTC    +      + S +V + +LD  R  P     DI      +YGL ++    +   
Sbjct: 221 HTCHGVIRLQKSKMMGSKVVKSIVLDKIRANPNKKPIDIADEIKSDYGLDVAYRTVWYGT 280

Query: 188 KLALAELYGDVALSYNELLWYTKELKRRDPGNCVDLQVNEESGKFERVFIAFESSINGFK 9
           +LA   L+GD A SY +LLW+++ + + +P + + ++ + E+ +F+R+F+++ + +  F+
Sbjct: 281 ELAKTALHGDEAESYAQLLWFSESVMKSNPDSRIVVEFHRETHRFQRMFVSYGAWMKSFQ 340

Query: 8   YC 3
            C
Sbjct: 341 SC 342


>ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|222844529|gb|EEE82076.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/120 (27%), Positives = 61/120 (50%)
 Frame = -2

Query: 368 HTCGFAFKDYNHPPLTSYLVMTHILDFARDKPFLSLGDITSFYSREYGLKISKHMSYTSK 189
           HTCG      +HP  +  +V   + +   D P +   +I +   +E+G+++         
Sbjct: 79  HTCGAGTGTDSHPRASKKVVEGIVKEKLHDSPNVKPKEIANQIQQEFGIELRYSQVRRWM 138

Query: 188 KLALAELYGDVALSYNELLWYTKELKRRDPGNCVDLQVNEESGKFERVFIAFESSINGFK 9
           + A  E+ G    +YN+L W  +++   +PG  V L   E+ G F R+F+AF +S++GF+
Sbjct: 139 EAATEEIQGSYREAYNQLPWLCEKIVETNPGTAVSLNTREDLG-FHRLFVAFHASLHGFQ 197


>emb|CAN82231.1| hypothetical protein VITISV_005121 [Vitis vinifera]
          Length = 384

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
 Frame = -2

Query: 365 TCGFAFKDYN-------------HPPLTSYLVMTHILDFARDKPFLSLGDITSFYSREYG 225
           T  FA   YN             H  L S L++ HI    + +  LS+  I +    ++G
Sbjct: 199 TTSFAINKYNGPHKYANPCLNRDHQQLDSNLIVAHIQGMIKAQFTLSVAAIQASIVEKFG 258

Query: 224 LKISKHMSYTSKKLALAELYGDVALSYNELLWYTKELKRRDPGNCV-----DLQVNEESG 60
            +IS   +  +K  AL  L+GD   SY EL ++   L++ +PG CV      L + E + 
Sbjct: 259 YQISYKKASKAKLKALTNLFGDFYKSYAELPYFFIALEQANPG-CVVISKTFLGIMENTK 317

Query: 59  KFERVFIAFESSINGFKYC 3
            F+RVF  F  SI GFK+C
Sbjct: 318 IFQRVFWTFHPSIEGFKHC 336


>ref|XP_002269076.1| PREDICTED: uncharacterized protein LOC100253276 isoform 1 [Vitis
           vinifera] gi|359475510|ref|XP_003631693.1| PREDICTED:
           uncharacterized protein LOC100253276 isoform 2 [Vitis
           vinifera] gi|147838852|emb|CAN72363.1| hypothetical
           protein VITISV_011058 [Vitis vinifera]
          Length = 583

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/119 (29%), Positives = 63/119 (52%)
 Frame = -2

Query: 368 HTCGFAFKDYNHPPLTSYLVMTHILDFARDKPFLSLGDITSFYSREYGLKISKHMSYTSK 189
           HTCG   ++ +H     ++V + I +  RD       DI     ++YG+ I    ++ +K
Sbjct: 76  HTCGKNAQNGHHQASVDWIV-SFIEERLRDNINYKPKDILHDIHKQYGITIPYKQAWRAK 134

Query: 188 KLALAELYGDVALSYNELLWYTKELKRRDPGNCVDLQVNEESGKFERVFIAFESSINGF 12
           +  LA +YG     Y  L  Y +E+KR +PG+  ++  +    +F+R+F++F +SI GF
Sbjct: 135 ERGLAAIYGSSEEGYCLLPAYCEEIKRANPGSVAEVFTSGADNRFQRLFVSFYASIYGF 193


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