BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037265
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328439.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
ref|XP_002319545.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_002512373.1| rac-GTP binding protein, putative [Ricinus c...   141   6e-32
gb|AFK45596.1| unknown [Medicago truncatula]                          137   1e-30
ref|XP_003591106.1| Mitochondrial Rho GTPase [Medicago truncatul...   137   1e-30

>ref|XP_002328439.1| predicted protein [Populus trichocarpa] gi|222838154|gb|EEE76519.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/122 (57%), Positives = 92/122 (75%)
 Frame = -2

Query: 366 LRVVVIGDSGTGKSSLIVSAISQTFSPNSPPLLPPTVFHSHFFPHNPVPLIVIDTSSRVE 187
           +R+VV GD GTGKSSLIV+AIS+TF  + PP+LPPT     F+P   VP+ +IDTSS+VE
Sbjct: 16  VRIVVAGDRGTGKSSLIVTAISETFPSSVPPVLPPTRMPDDFYPDR-VPITIIDTSSKVE 74

Query: 186 NERKRDKKLKAADGVVVTYACDRIETLERLSTLWMPALRHMKLNVPVVVVGCKTDAGSET 7
           +  K  ++LK AD VV+TYACDR ETL+RLST W+P LR +++ VPV+VVGCK D   E 
Sbjct: 75  DAGKVAEELKRADAVVLTYACDRPETLDRLSTFWLPELRQLEVKVPVIVVGCKLDLRDEN 134

Query: 6   KE 1
           ++
Sbjct: 135 QQ 136


>ref|XP_002319545.1| predicted protein [Populus trichocarpa] gi|222857921|gb|EEE95468.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/122 (57%), Positives = 91/122 (74%)
 Frame = -2

Query: 366 LRVVVIGDSGTGKSSLIVSAISQTFSPNSPPLLPPTVFHSHFFPHNPVPLIVIDTSSRVE 187
           +R+VV GD GTGKSSLIV+AIS TF  + PP+LPPT     F+P   VP+ +IDTSS+VE
Sbjct: 16  VRIVVAGDRGTGKSSLIVTAISDTFPSSIPPVLPPTRMPDDFYPDR-VPITIIDTSSKVE 74

Query: 186 NERKRDKKLKAADGVVVTYACDRIETLERLSTLWMPALRHMKLNVPVVVVGCKTDAGSET 7
           +  K  ++LK AD VV+TYACDR ETL+RLST W+P LR +++ VPV+VVGCK D   E 
Sbjct: 75  DAGKVAEELKRADAVVLTYACDRPETLDRLSTFWLPELRQLEVKVPVIVVGCKLDLRDEN 134

Query: 6   KE 1
           ++
Sbjct: 135 QQ 136


>ref|XP_002512373.1| rac-GTP binding protein, putative [Ricinus communis]
           gi|223548334|gb|EEF49825.1| rac-GTP binding protein,
           putative [Ricinus communis]
          Length = 583

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 3/137 (2%)
 Frame = -2

Query: 402 TTGKPSSINP---KELRVVVIGDSGTGKSSLIVSAISQTFSPNSPPLLPPTVFHSHFFPH 232
           T    +S NP     +R+VV GD GTGKSSLIV+A   TF  N PP+LPPT     F+P 
Sbjct: 2   TKAASASANPGGRSGVRIVVAGDRGTGKSSLIVTAAVDTFPANVPPVLPPTRLPEDFYPD 61

Query: 231 NPVPLIVIDTSSRVENERKRDKKLKAADGVVVTYACDRIETLERLSTLWMPALRHMKLNV 52
             +P+ +IDTSSRVE+  K  ++LK AD VV+TYACDR ETL+RLST W+P LR +++ V
Sbjct: 62  R-IPVTIIDTSSRVEDSGKVAEELKRADAVVLTYACDRPETLDRLSTFWLPELRRLEVKV 120

Query: 51  PVVVVGCKTDAGSETKE 1
           PV+VVGCK D   E ++
Sbjct: 121 PVIVVGCKLDLRDENQQ 137


>gb|AFK45596.1| unknown [Medicago truncatula]
          Length = 452

 Score =  137 bits (344), Expect = 1e-30
 Identities = 68/133 (51%), Positives = 95/133 (71%), Gaps = 3/133 (2%)
 Frame = -2

Query: 390 PSSINPKE---LRVVVIGDSGTGKSSLIVSAISQTFSPNSPPLLPPTVFHSHFFPHNPVP 220
           P+++NP     +R+VV GD GTGKSSLI +A ++ F PN  P+LPPT      +P   VP
Sbjct: 6   PNTVNPHARTGVRIVVAGDQGTGKSSLISTASTENFRPNVAPVLPPTTLAVDLYPDR-VP 64

Query: 219 LIVIDTSSRVENERKRDKKLKAADGVVVTYACDRIETLERLSTLWMPALRHMKLNVPVVV 40
           + +IDTSSRV +  +  ++L+ AD VV+TYACDR ETLE LST+W+P LR++++NVPV+V
Sbjct: 65  ITIIDTSSRVADSNRVAEELQRADTVVLTYACDRPETLENLSTVWLPHLRNLEVNVPVIV 124

Query: 39  VGCKTDAGSETKE 1
           VGCK D   E ++
Sbjct: 125 VGCKLDLRDENQQ 137


>ref|XP_003591106.1| Mitochondrial Rho GTPase [Medicago truncatula]
           gi|355480154|gb|AES61357.1| Mitochondrial Rho GTPase
           [Medicago truncatula]
          Length = 646

 Score =  137 bits (344), Expect = 1e-30
 Identities = 68/133 (51%), Positives = 95/133 (71%), Gaps = 3/133 (2%)
 Frame = -2

Query: 390 PSSINPKE---LRVVVIGDSGTGKSSLIVSAISQTFSPNSPPLLPPTVFHSHFFPHNPVP 220
           P+++NP     +R+VV GD GTGKSSLI +A ++ F PN  P+LPPT      +P   VP
Sbjct: 6   PNTVNPHARTGVRIVVAGDQGTGKSSLISTASTENFRPNVAPVLPPTTLAVDLYPDR-VP 64

Query: 219 LIVIDTSSRVENERKRDKKLKAADGVVVTYACDRIETLERLSTLWMPALRHMKLNVPVVV 40
           + +IDTSSRV +  +  ++L+ AD VV+TYACDR ETLE LST+W+P LR++++NVPV+V
Sbjct: 65  ITIIDTSSRVADSNRVAEELQRADTVVLTYACDRPETLENLSTVWLPHLRNLEVNVPVIV 124

Query: 39  VGCKTDAGSETKE 1
           VGCK D   E ++
Sbjct: 125 VGCKLDLRDENQQ 137