BLASTX nr result

ID: Coptis21_contig00037234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037234
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65610.1| hypothetical protein VITISV_006634 [Vitis vinifera]    62   4e-08
ref|XP_002279892.1| PREDICTED: uncharacterized protein LOC100256...    62   6e-08
emb|CAN83622.1| hypothetical protein VITISV_007919 [Vitis vinifera]    62   6e-08

>emb|CAN65610.1| hypothetical protein VITISV_006634 [Vitis vinifera]
          Length = 600

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/49 (63%), Positives = 34/49 (69%)
 Frame = +2

Query: 185 TGGATNGREFQHPSFQNENYLSPNRQNWNMEFKDATSVAQAVAESAERA 331
           TG       F+H   +N N LSP RQNWNMEFKDAT+ AQA AESAERA
Sbjct: 22  TGTVYEEMGFRHSYSENVNPLSPGRQNWNMEFKDATAAAQAAAESAERA 70


>ref|XP_002279892.1| PREDICTED: uncharacterized protein LOC100256064 [Vitis vinifera]
           gi|297738702|emb|CBI27947.3| unnamed protein product
           [Vitis vinifera]
          Length = 1179

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/40 (72%), Positives = 32/40 (80%)
 Frame = +2

Query: 212 FQHPSFQNENYLSPNRQNWNMEFKDATSVAQAVAESAERA 331
           F+H   +N N LSP RQNWNMEFKDAT+ AQA AESAERA
Sbjct: 291 FRHSYSENVNPLSPGRQNWNMEFKDATAAAQAAAESAERA 330


>emb|CAN83622.1| hypothetical protein VITISV_007919 [Vitis vinifera]
          Length = 1400

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/40 (72%), Positives = 32/40 (80%)
 Frame = +2

Query: 212 FQHPSFQNENYLSPNRQNWNMEFKDATSVAQAVAESAERA 331
           F+H   +N N LSP RQNWNMEFKDAT+ AQA AESAERA
Sbjct: 309 FRHSYSENVNPLSPGRQNWNMEFKDATAAAQAAAESAERA 348


Top