BLASTX nr result
ID: Coptis21_contig00037233
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00037233 (339 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002311176.1| predicted protein [Populus trichocarpa] gi|2... 68 7e-10 ref|XP_002316276.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 ref|NP_568097.1| uncharacterized protein [Arabidopsis thaliana] ... 65 4e-09 gb|AAM62581.1| unknown [Arabidopsis thaliana] 65 4e-09 ref|XP_002873041.1| hypothetical protein ARALYDRAFT_486999 [Arab... 63 3e-08 >ref|XP_002311176.1| predicted protein [Populus trichocarpa] gi|222850996|gb|EEE88543.1| predicted protein [Populus trichocarpa] Length = 66 Score = 68.2 bits (165), Expect = 7e-10 Identities = 34/64 (53%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Frame = +2 Query: 95 IEEGCTTPRHGEYQIESNLVCXXXXXXXXFLYGKKRDPPKSGYFQPPDLE-VVFSIRPRP 271 ++EGC TPR EYQI + LVC F ++R PPK GYFQPPDLE V+ I PR Sbjct: 3 VDEGCRTPRRSEYQIPAPLVCPPPPKKKPFYVKQRRVPPKEGYFQPPDLEGVLMDIAPRR 62 Query: 272 EAFA 283 EA A Sbjct: 63 EACA 66 >ref|XP_002316276.1| predicted protein [Populus trichocarpa] gi|222865316|gb|EEF02447.1| predicted protein [Populus trichocarpa] Length = 66 Score = 66.2 bits (160), Expect = 3e-09 Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Frame = +2 Query: 95 IEEGCTTPRHGEYQIESNLVCXXXXXXXXFLYGKKRDPPKSGYFQPPDLE-VVFSIRPRP 271 ++EGC TPR EYQI + LVC ++R+PPK GYFQPPDLE ++ +I PR Sbjct: 3 VDEGCRTPRRSEYQIPAALVCPPPPKKKPCYAKQRRNPPKEGYFQPPDLEAILLNIAPRR 62 Query: 272 EAFA 283 EA A Sbjct: 63 EACA 66 >ref|NP_568097.1| uncharacterized protein [Arabidopsis thaliana] gi|94807648|gb|ABF47121.1| At5g02220 [Arabidopsis thaliana] gi|332003063|gb|AED90446.1| uncharacterized protein [Arabidopsis thaliana] Length = 72 Score = 65.5 bits (158), Expect = 4e-09 Identities = 33/65 (50%), Positives = 40/65 (61%) Frame = +2 Query: 89 EFIEEGCTTPRHGEYQIESNLVCXXXXXXXXFLYGKKRDPPKSGYFQPPDLEVVFSIRPR 268 E EEGCTTPR Y+I VC + +KRDPP++GYFQPPDLE +F +PR Sbjct: 9 EMAEEGCTTPRSTMYRIPVASVCPPPPRKKLMVV-RKRDPPRNGYFQPPDLETLFYAQPR 67 Query: 269 PEAFA 283 EA A Sbjct: 68 REACA 72 >gb|AAM62581.1| unknown [Arabidopsis thaliana] Length = 72 Score = 65.5 bits (158), Expect = 4e-09 Identities = 33/65 (50%), Positives = 40/65 (61%) Frame = +2 Query: 89 EFIEEGCTTPRHGEYQIESNLVCXXXXXXXXFLYGKKRDPPKSGYFQPPDLEVVFSIRPR 268 E EEGCTTPR Y+I VC + +KRDPP++GYFQPPDLE +F +PR Sbjct: 9 EMAEEGCTTPRSTMYRIPVASVCPPPPRKKLMVV-RKRDPPRNGYFQPPDLETLFYAQPR 67 Query: 269 PEAFA 283 EA A Sbjct: 68 REASA 72 >ref|XP_002873041.1| hypothetical protein ARALYDRAFT_486999 [Arabidopsis lyrata subsp. lyrata] gi|297318878|gb|EFH49300.1| hypothetical protein ARALYDRAFT_486999 [Arabidopsis lyrata subsp. lyrata] Length = 68 Score = 62.8 bits (151), Expect = 3e-08 Identities = 31/62 (50%), Positives = 38/62 (61%) Frame = +2 Query: 83 AYEFIEEGCTTPRHGEYQIESNLVCXXXXXXXXFLYGKKRDPPKSGYFQPPDLEVVFSIR 262 A E EEGCTTPR Y+I VC + +KRDPP++GYFQPPDLE +F + Sbjct: 7 ATEMAEEGCTTPRSRMYRIPVASVCPPPPRKKLMVV-RKRDPPRNGYFQPPDLETLFYAQ 65 Query: 263 PR 268 PR Sbjct: 66 PR 67