BLASTX nr result

ID: Coptis21_contig00037233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037233
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311176.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002316276.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|NP_568097.1| uncharacterized protein [Arabidopsis thaliana] ...    65   4e-09
gb|AAM62581.1| unknown [Arabidopsis thaliana]                          65   4e-09
ref|XP_002873041.1| hypothetical protein ARALYDRAFT_486999 [Arab...    63   3e-08

>ref|XP_002311176.1| predicted protein [Populus trichocarpa] gi|222850996|gb|EEE88543.1|
           predicted protein [Populus trichocarpa]
          Length = 66

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/64 (53%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = +2

Query: 95  IEEGCTTPRHGEYQIESNLVCXXXXXXXXFLYGKKRDPPKSGYFQPPDLE-VVFSIRPRP 271
           ++EGC TPR  EYQI + LVC        F   ++R PPK GYFQPPDLE V+  I PR 
Sbjct: 3   VDEGCRTPRRSEYQIPAPLVCPPPPKKKPFYVKQRRVPPKEGYFQPPDLEGVLMDIAPRR 62

Query: 272 EAFA 283
           EA A
Sbjct: 63  EACA 66


>ref|XP_002316276.1| predicted protein [Populus trichocarpa] gi|222865316|gb|EEF02447.1|
           predicted protein [Populus trichocarpa]
          Length = 66

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = +2

Query: 95  IEEGCTTPRHGEYQIESNLVCXXXXXXXXFLYGKKRDPPKSGYFQPPDLE-VVFSIRPRP 271
           ++EGC TPR  EYQI + LVC            ++R+PPK GYFQPPDLE ++ +I PR 
Sbjct: 3   VDEGCRTPRRSEYQIPAALVCPPPPKKKPCYAKQRRNPPKEGYFQPPDLEAILLNIAPRR 62

Query: 272 EAFA 283
           EA A
Sbjct: 63  EACA 66


>ref|NP_568097.1| uncharacterized protein [Arabidopsis thaliana]
           gi|94807648|gb|ABF47121.1| At5g02220 [Arabidopsis
           thaliana] gi|332003063|gb|AED90446.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 72

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/65 (50%), Positives = 40/65 (61%)
 Frame = +2

Query: 89  EFIEEGCTTPRHGEYQIESNLVCXXXXXXXXFLYGKKRDPPKSGYFQPPDLEVVFSIRPR 268
           E  EEGCTTPR   Y+I    VC         +  +KRDPP++GYFQPPDLE +F  +PR
Sbjct: 9   EMAEEGCTTPRSTMYRIPVASVCPPPPRKKLMVV-RKRDPPRNGYFQPPDLETLFYAQPR 67

Query: 269 PEAFA 283
            EA A
Sbjct: 68  REACA 72


>gb|AAM62581.1| unknown [Arabidopsis thaliana]
          Length = 72

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/65 (50%), Positives = 40/65 (61%)
 Frame = +2

Query: 89  EFIEEGCTTPRHGEYQIESNLVCXXXXXXXXFLYGKKRDPPKSGYFQPPDLEVVFSIRPR 268
           E  EEGCTTPR   Y+I    VC         +  +KRDPP++GYFQPPDLE +F  +PR
Sbjct: 9   EMAEEGCTTPRSTMYRIPVASVCPPPPRKKLMVV-RKRDPPRNGYFQPPDLETLFYAQPR 67

Query: 269 PEAFA 283
            EA A
Sbjct: 68  REASA 72


>ref|XP_002873041.1| hypothetical protein ARALYDRAFT_486999 [Arabidopsis lyrata subsp.
           lyrata] gi|297318878|gb|EFH49300.1| hypothetical protein
           ARALYDRAFT_486999 [Arabidopsis lyrata subsp. lyrata]
          Length = 68

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/62 (50%), Positives = 38/62 (61%)
 Frame = +2

Query: 83  AYEFIEEGCTTPRHGEYQIESNLVCXXXXXXXXFLYGKKRDPPKSGYFQPPDLEVVFSIR 262
           A E  EEGCTTPR   Y+I    VC         +  +KRDPP++GYFQPPDLE +F  +
Sbjct: 7   ATEMAEEGCTTPRSRMYRIPVASVCPPPPRKKLMVV-RKRDPPRNGYFQPPDLETLFYAQ 65

Query: 263 PR 268
           PR
Sbjct: 66  PR 67


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