BLASTX nr result

ID: Coptis21_contig00037216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037216
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278313.2| PREDICTED: ABC transporter G family member 2...   253   1e-65
emb|CBI36070.3| unnamed protein product [Vitis vinifera]              253   1e-65
ref|XP_003632787.1| PREDICTED: ABC transporter G family member 2...   251   3e-65
emb|CBI36062.3| unnamed protein product [Vitis vinifera]              251   3e-65
ref|XP_003627035.1| ABC transporter family pleiotropic drug resi...   249   1e-64

>ref|XP_002278313.2| PREDICTED: ABC transporter G family member 29-like [Vitis vinifera]
          Length = 1438

 Score =  253 bits (645), Expect = 1e-65
 Identities = 120/140 (85%), Positives = 130/140 (92%)
 Frame = +3

Query: 3   IIGDQMRRGISGGQRKRVTTGEMIVSPTKTLFMDEISTGLDTSTTHQIVKCLQQIVHLTE 182
           ++GD+M+RGISGGQ+KRVTTGEMIV PTKTLFMDEISTGLD+STT QIVKCLQQIVHLTE
Sbjct: 328 MVGDEMQRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLTE 387

Query: 183 CTVLMSLLQPGPETFDLFDDIVFLSEGQIVYHGPREKVLEFFESCGFRCPERKGTADF*Q 362
            T+LMSLLQP PETFDLFDDI+ LSEGQIVY GPR  +LEFFESCGFRCPERKGTADF Q
Sbjct: 388 ATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRAHILEFFESCGFRCPERKGTADFLQ 447

Query: 363 EVTSRNDQEQYWAEKSKPYR 422
           EVTSR DQEQYWA+KSKPYR
Sbjct: 448 EVTSRKDQEQYWADKSKPYR 467



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/109 (32%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
 Frame = +3

Query: 3    IIGDQMRRGISGGQRKRVTTGEMIVSPTKTLFMDEISTGLDTSTTHQIVKCLQQIVHLTE 182
            I+G     G+S  QRKR+T    +V+    +FMDE ++GLD      +++ ++  V  T 
Sbjct: 979  IVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TG 1037

Query: 183  CTVLMSLLQPGPETFDLFDDIVFLSE-GQIVYHGP----REKVLEFFES 314
             TV+ ++ QP  + F+ FD+++ +   GQ++Y GP      K++E+FE+
Sbjct: 1038 RTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEA 1086


>emb|CBI36070.3| unnamed protein product [Vitis vinifera]
          Length = 1493

 Score =  253 bits (645), Expect = 1e-65
 Identities = 120/140 (85%), Positives = 130/140 (92%)
 Frame = +3

Query: 3   IIGDQMRRGISGGQRKRVTTGEMIVSPTKTLFMDEISTGLDTSTTHQIVKCLQQIVHLTE 182
           ++GD+M+RGISGGQ+KRVTTGEMIV PTKTLFMDEISTGLD+STT QIVKCLQQIVHLTE
Sbjct: 328 MVGDEMQRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLTE 387

Query: 183 CTVLMSLLQPGPETFDLFDDIVFLSEGQIVYHGPREKVLEFFESCGFRCPERKGTADF*Q 362
            T+LMSLLQP PETFDLFDDI+ LSEGQIVY GPR  +LEFFESCGFRCPERKGTADF Q
Sbjct: 388 ATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRAHILEFFESCGFRCPERKGTADFLQ 447

Query: 363 EVTSRNDQEQYWAEKSKPYR 422
           EVTSR DQEQYWA+KSKPYR
Sbjct: 448 EVTSRKDQEQYWADKSKPYR 467



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/109 (32%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
 Frame = +3

Query: 3    IIGDQMRRGISGGQRKRVTTGEMIVSPTKTLFMDEISTGLDTSTTHQIVKCLQQIVHLTE 182
            I+G     G+S  QRKR+T    +V+    +FMDE ++GLD      +++ ++  V  T 
Sbjct: 1034 IVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TG 1092

Query: 183  CTVLMSLLQPGPETFDLFDDIVFLSE-GQIVYHGP----REKVLEFFES 314
             TV+ ++ QP  + F+ FD+++ +   GQ++Y GP      K++E+FE+
Sbjct: 1093 RTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEA 1141


>ref|XP_003632787.1| PREDICTED: ABC transporter G family member 29-like [Vitis vinifera]
          Length = 1434

 Score =  251 bits (642), Expect = 3e-65
 Identities = 119/140 (85%), Positives = 130/140 (92%)
 Frame = +3

Query: 3   IIGDQMRRGISGGQRKRVTTGEMIVSPTKTLFMDEISTGLDTSTTHQIVKCLQQIVHLTE 182
           ++GD+M+RGISGGQ+KRVTTGEMIV PTKTLFMDEISTGLD+STT QIVKCLQQIVHLTE
Sbjct: 328 MVGDEMQRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLTE 387

Query: 183 CTVLMSLLQPGPETFDLFDDIVFLSEGQIVYHGPREKVLEFFESCGFRCPERKGTADF*Q 362
            T+LMSLLQP PETFDLFDDI+ LSEGQIVY GPR  +LEFFESCGFRCPERKGTADF Q
Sbjct: 388 ATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRAHILEFFESCGFRCPERKGTADFLQ 447

Query: 363 EVTSRNDQEQYWAEKSKPYR 422
           EVTSR DQEQYWA++SKPYR
Sbjct: 448 EVTSRKDQEQYWADRSKPYR 467



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/108 (31%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
 Frame = +3

Query: 3    IIGDQMRRGISGGQRKRVTTGEMIVSPTKTLFMDEISTGLDTSTTHQIVKCLQQIVHLTE 182
            I+G     G+S  QRKR+T    +V+    +FMDE ++GLD      +++ ++  V  T 
Sbjct: 975  IVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TG 1033

Query: 183  CTVLMSLLQPGPETFDLFDDIVFLSE-GQIVYHGP----REKVLEFFE 311
             TV+ ++ QP  + F+ F++++ +   GQ++Y GP      K++E+FE
Sbjct: 1034 RTVVCTIHQPSIDIFEAFNELLLMKRGGQVIYSGPLGRNSHKIIEYFE 1081


>emb|CBI36062.3| unnamed protein product [Vitis vinifera]
          Length = 950

 Score =  251 bits (642), Expect = 3e-65
 Identities = 119/140 (85%), Positives = 130/140 (92%)
 Frame = +3

Query: 3   IIGDQMRRGISGGQRKRVTTGEMIVSPTKTLFMDEISTGLDTSTTHQIVKCLQQIVHLTE 182
           ++GD+M+RGISGGQ+KRVTTGEMIV PTKTLFMDEISTGLD+STT QIVKCLQQIVHLTE
Sbjct: 328 MVGDEMQRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLTE 387

Query: 183 CTVLMSLLQPGPETFDLFDDIVFLSEGQIVYHGPREKVLEFFESCGFRCPERKGTADF*Q 362
            T+LMSLLQP PETFDLFDDI+ LSEGQIVY GPR  +LEFFESCGFRCPERKGTADF Q
Sbjct: 388 ATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRAHILEFFESCGFRCPERKGTADFLQ 447

Query: 363 EVTSRNDQEQYWAEKSKPYR 422
           EVTSR DQEQYWA++SKPYR
Sbjct: 448 EVTSRKDQEQYWADRSKPYR 467



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/109 (31%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
 Frame = +3

Query: 3    IIGDQMRRGISGGQRKRVTTGEMIVSPTKTLFMDEISTGLDTSTTHQIVKCLQQIVHLTE 182
            I+G     G+S  QRKR+T    +V+    +FMDE ++GLD      +++ ++  V  T 
Sbjct: 824  IVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TG 882

Query: 183  CTVLMSLLQPGPETFDLFDDIVFLSE-GQIVYHGP----REKVLEFFES 314
             TV+ ++ QP  + F+ F++++ +   GQ++Y GP      K++E+FE+
Sbjct: 883  RTVVCTIHQPSIDIFEAFNELLLMKRGGQVIYSGPLGRNSHKIIEYFEA 931


>ref|XP_003627035.1| ABC transporter family pleiotropic drug resistance protein
           [Medicago truncatula] gi|355521057|gb|AET01511.1| ABC
           transporter family pleiotropic drug resistance protein
           [Medicago truncatula]
          Length = 1289

 Score =  249 bits (637), Expect = 1e-64
 Identities = 116/140 (82%), Positives = 130/140 (92%)
 Frame = +3

Query: 3   IIGDQMRRGISGGQRKRVTTGEMIVSPTKTLFMDEISTGLDTSTTHQIVKCLQQIVHLTE 182
           I+GD+M RG+SGGQ+KRVTTGEMIV PTKTLFMDEISTGLD+STT QIVKCLQQIVHLTE
Sbjct: 307 IVGDEMNRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLTE 366

Query: 183 CTVLMSLLQPGPETFDLFDDIVFLSEGQIVYHGPREKVLEFFESCGFRCPERKGTADF*Q 362
            T+LMSLLQP PETFDLFDDI+ +SEGQ+VY GPRE ++EFFESCGFRCPERKGTADF Q
Sbjct: 367 GTILMSLLQPAPETFDLFDDIILISEGQVVYQGPREHIVEFFESCGFRCPERKGTADFLQ 426

Query: 363 EVTSRNDQEQYWAEKSKPYR 422
           EVTSR DQEQYWA+K++PYR
Sbjct: 427 EVTSRKDQEQYWADKNRPYR 446



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
 Frame = +3

Query: 3    IIGDQMRRGISGGQRKRVTTGEMIVSPTKTLFMDEISTGLDTSTTHQIVKCLQQIVHLTE 182
            I+G     G+S  QRKR+T    +V+    +FMDE ++GLD      +++ ++  V  T 
Sbjct: 1002 IVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TG 1060

Query: 183  CTVLMSLLQPGPETFDLFDDIVFLSE-GQIVYHGP----REKVLEFFE 311
             TV+ ++ QP  + F+ FD+++ +   GQ++Y GP      K++E+FE
Sbjct: 1061 RTVVCTIHQPSIDIFEAFDELILMKRGGQLIYGGPLGRNSHKIIEYFE 1108


Top