BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037213
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869806.1| pentatricopeptide repeat-containing protein ...    98   6e-19
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...    98   6e-19
ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containi...    96   4e-18

>ref|XP_002869806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315642|gb|EFH46065.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 852

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/96 (47%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
 Frame = -3

Query: 282 VETAQCYFDLMPWRNTVSWTIMIGGYSKVGNVDKAELLFDQMVEREVVAWTAMITCYVQN 103
           ++ A+ YFD MP +N+VSW  MI GY+K+G+V  AE LF QM  ++ + + AMI CY QN
Sbjct: 509 MKLARTYFDTMPQKNSVSWITMISGYTKLGDVQSAEKLFRQMSRKDKLVYDAMIACYAQN 568

Query: 102 GKPEEAVKLFNEMVAAN--VKLDGVTMLALVSAVSQ 1
           GKP++A+KLF++M+ +N  ++ D +T+ ++VSA SQ
Sbjct: 569 GKPKDALKLFSQMLESNSDIQPDEITLSSVVSASSQ 604



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/73 (38%), Positives = 46/73 (63%)
 Frame = -3

Query: 282 VETAQCYFDLMPWRNTVSWTIMIGGYSKVGNVDKAELLFDQMVEREVVAWTAMITCYVQN 103
           +E A+  FD +  +NTVSW  ++ GY + GN+D+A  +FD++ E++VV+W  +I+ Y + 
Sbjct: 416 IEMAKKVFDDIAEKNTVSWNSLLHGYLESGNLDEARRVFDKIPEKDVVSWNLIISSYAKK 475

Query: 102 GKPEEAVKLFNEM 64
           G    A  LF  M
Sbjct: 476 GDMSNACSLFLTM 488


>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/94 (52%), Positives = 69/94 (73%)
 Frame = -3

Query: 282 VETAQCYFDLMPWRNTVSWTIMIGGYSKVGNVDKAELLFDQMVEREVVAWTAMITCYVQN 103
           + +A+  FD MP RN VS+T MI GY+K G++  A  +F++  ER+VVAW+A+I+ YVQN
Sbjct: 236 LRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQN 295

Query: 102 GKPEEAVKLFNEMVAANVKLDGVTMLALVSAVSQ 1
           G+P EAVK+F EM + NVK D   M++L+SA SQ
Sbjct: 296 GQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQ 329



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/75 (45%), Positives = 47/75 (62%)
 Frame = -3

Query: 273 AQCYFDLMPWRNTVSWTIMIGGYSKVGNVDKAELLFDQMVEREVVAWTAMITCYVQNGKP 94
           A+  FD M  RN VSWT MI GY+   ++ +A  LFD+M E+  V+W A+I+ YV+ G  
Sbjct: 177 ARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDL 236

Query: 93  EEAVKLFNEMVAANV 49
             A K+F+EM   NV
Sbjct: 237 RSARKMFDEMPHRNV 251


>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/96 (48%), Positives = 69/96 (71%), Gaps = 2/96 (2%)
 Frame = -3

Query: 282 VETAQCYFDLMPWRNTVSWTIMIGGYSKVGNVDKAELLFDQMVEREVVAWTAMITCYVQN 103
           +++A+ +FD MP RN VSW  MI GYSK G+VD A  LFDQ+  ++++ + AMI CY QN
Sbjct: 252 IDSARSFFDAMPQRNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQN 311

Query: 102 GKPEEAVKLFNEMV--AANVKLDGVTMLALVSAVSQ 1
            +P+EA+KLFN M+    NV+ D +T+ +++SA SQ
Sbjct: 312 SRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQ 347



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/91 (37%), Positives = 53/91 (58%)
 Frame = -3

Query: 273 AQCYFDLMPWRNTVSWTIMIGGYSKVGNVDKAELLFDQMVEREVVAWTAMITCYVQNGKP 94
           AQ  FD +P ++ +SW  MI GY++ G+++KA  LF QM ER   +W AMI+ YV+ G  
Sbjct: 193 AQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDI 252

Query: 93  EEAVKLFNEMVAANVKLDGVTMLALVSAVSQ 1
           + A   F+ M   N     V+ + ++S  S+
Sbjct: 253 DSARSFFDAMPQRN----NVSWMTMISGYSK 279



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/77 (38%), Positives = 50/77 (64%)
 Frame = -3

Query: 282 VETAQCYFDLMPWRNTVSWTIMIGGYSKVGNVDKAELLFDQMVEREVVAWTAMITCYVQN 103
           +E A+  FD M  RN VSW  M+ GY K G++  A+ +FD++ +++V++W +MI+ Y + 
Sbjct: 159 MEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARA 218

Query: 102 GKPEEAVKLFNEMVAAN 52
           G  E+A+ LF +M   N
Sbjct: 219 GDMEKALSLFQQMPERN 235



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/72 (40%), Positives = 49/72 (68%)
 Frame = -3

Query: 225 TIMIGGYSKVGNVDKAELLFDQMVEREVVAWTAMITCYVQNGKPEEAVKLFNEMVAANVK 46
           T ++  Y+K G++DKA  LF  + ++++VA+TAMI     NGK  +A+KLF+EMV A + 
Sbjct: 374 TALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIF 433

Query: 45  LDGVTMLALVSA 10
            + +T + L++A
Sbjct: 434 PNSITFIGLLTA 445


>ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Glycine max]
          Length = 576

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/94 (48%), Positives = 69/94 (73%), Gaps = 2/94 (2%)
 Frame = -3

Query: 276 TAQCYFDLMPWRNTVSWTIMIGGYSKVGNVDKAELLFDQMVEREVVAWTAMITCYVQNGK 97
           +A+ +FD MP RN VSW  MI GYSK G+VD A  LFDQM  ++++++ AMI CY QN K
Sbjct: 250 SAREFFDTMPRRNCVSWITMIAGYSKGGDVDSARKLFDQMDHKDLLSYNAMIACYAQNSK 309

Query: 96  PEEAVKLFNEMVAANVKL--DGVTMLALVSAVSQ 1
           P+EA++LFN+M+  ++ +  D +T+ +++SA SQ
Sbjct: 310 PKEALELFNDMLKQDIYVHPDKMTLASVISACSQ 343



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/76 (36%), Positives = 47/76 (61%)
 Frame = -3

Query: 276 TAQCYFDLMPWRNTVSWTIMIGGYSKVGNVDKAELLFDQMVEREVVAWTAMITCYVQNGK 97
           TA+  FD M  ++ VSW  ++ GY K GN+D+A+ LF ++  ++V++W +MI+ Y + G 
Sbjct: 157 TARKVFDEMANKSVVSWNSLLSGYVKAGNLDEAQYLFSEIPGKDVISWNSMISGYAKAGN 216

Query: 96  PEEAVKLFNEMVAANV 49
             +A  LF  M   N+
Sbjct: 217 VGQACTLFQRMPERNL 232



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/87 (36%), Positives = 50/87 (57%)
 Frame = -3

Query: 282 VETAQCYFDLMPWRNTVSWTIMIGGYSKVGNVDKAELLFDQMVEREVVAWTAMITCYVQN 103
           ++ AQ  F  +P ++ +SW  MI GY+K GNV +A  LF +M ER + +W AMI  ++  
Sbjct: 186 LDEAQYLFSEIPGKDVISWNSMISGYAKAGNVGQACTLFQRMPERNLSSWNAMIAGFIDC 245

Query: 102 GKPEEAVKLFNEMVAANVKLDGVTMLA 22
           G    A + F+ M   N  +  +TM+A
Sbjct: 246 GSLVSAREFFDTMPRRNC-VSWITMIA 271


>ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Vitis vinifera]
          Length = 464

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/91 (49%), Positives = 61/91 (67%)
 Frame = -3

Query: 282 VETAQCYFDLMPWRNTVSWTIMIGGYSKVGNVDKAELLFDQMVEREVVAWTAMITCYVQN 103
           + +A+  FD MP RNT SW  MI GYS++ NV+ AELLF QM  R++++WT MI CY QN
Sbjct: 92  MSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQN 151

Query: 102 GKPEEAVKLFNEMVAANVKLDGVTMLALVSA 10
            +  EA+ +FNEM    +  D VTM  ++SA
Sbjct: 152 KQFREALAVFNEMQTNGIDPDEVTMATIISA 182