BLASTX nr result

ID: Coptis21_contig00037144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037144
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265051.2| PREDICTED: uncharacterized protein LOC100245...    59   3e-07
ref|XP_002327656.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_004134851.1| PREDICTED: uncharacterized protein LOC101220...    57   2e-06
emb|CAN62559.1| hypothetical protein VITISV_009207 [Vitis vinifera]    57   2e-06
ref|XP_002303409.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002265051.2| PREDICTED: uncharacterized protein LOC100245548 [Vitis vinifera]
          Length = 1169

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/81 (41%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
 Frame = +3

Query: 3   SSWDFWDPFAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-CSKDTTSELA 179
           SSWDFWDPF P+                                       SKDT+SELA
Sbjct: 658 SSWDFWDPFVPSSSRSVTEEEWEATTMASEAPATTAVSASVTAPPSVVSGFSKDTSSELA 717

Query: 180 MVVSRNTKDLVEIITEVDEYF 242
           MVVSRN+KDL EI+ EVD+YF
Sbjct: 718 MVVSRNSKDLAEIVKEVDDYF 738


>ref|XP_002327656.1| predicted protein [Populus trichocarpa] gi|222836741|gb|EEE75134.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/80 (41%), Positives = 36/80 (45%)
 Frame = +3

Query: 3   SSWDFWDPFAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSKDTTSELAM 182
           S WDFWDPF P                                     E +  + SELAM
Sbjct: 119 SGWDFWDPFVPPPPISVEGEEWEEVTTTITTSEMVAVAPPSVASRFPKENASGSGSELAM 178

Query: 183 VVSRNTKDLVEIITEVDEYF 242
           VVSRN+KDLVEII EVDEYF
Sbjct: 179 VVSRNSKDLVEIIKEVDEYF 198


>ref|XP_004134851.1| PREDICTED: uncharacterized protein LOC101220098 [Cucumis sativus]
           gi|449491310|ref|XP_004158857.1| PREDICTED:
           uncharacterized LOC101220098 [Cucumis sativus]
          Length = 618

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/82 (43%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +3

Query: 3   SSWDFWDPFAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-CSKDTTS-EL 176
           S+WDFWDPF P+                                       SKDT+S EL
Sbjct: 121 STWDFWDPFVPSTSRTVTEEEWEATTIASEAMVTVTGAASSAPPPSVVSGFSKDTSSTEL 180

Query: 177 AMVVSRNTKDLVEIITEVDEYF 242
           AMVVSRNTKDLVEII E+DEYF
Sbjct: 181 AMVVSRNTKDLVEIIKELDEYF 202


>emb|CAN62559.1| hypothetical protein VITISV_009207 [Vitis vinifera]
          Length = 627

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/81 (40%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = +3

Query: 3   SSWDFWDPFAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-CSKDTTSELA 179
           SSWDFWDPF P+                                       SKDT+S LA
Sbjct: 116 SSWDFWDPFVPSSSRSVTEEEWEATTMASEAPATTAVSASVTAPPSVVSGFSKDTSSXLA 175

Query: 180 MVVSRNTKDLVEIITEVDEYF 242
           MVVSRN+KDL EI+ EVD+YF
Sbjct: 176 MVVSRNSKDLAEIVKEVDDYF 196


>ref|XP_002303409.1| predicted protein [Populus trichocarpa] gi|222840841|gb|EEE78388.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/82 (41%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = +3

Query: 3   SSWDFWDPFAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ECSKDTTSEL 176
           SSWDFWDPF P                                       E +  + SEL
Sbjct: 127 SSWDFWDPFVPPPPRSMEEEEEEWEEVTTTTTASEMVAVVPPSVVSGFSKETASGSGSEL 186

Query: 177 AMVVSRNTKDLVEIITEVDEYF 242
           AMVVSRN+KDLVEII EVDEYF
Sbjct: 187 AMVVSRNSKDLVEIIKEVDEYF 208


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