BLASTX nr result
ID: Coptis21_contig00037144
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00037144 (244 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265051.2| PREDICTED: uncharacterized protein LOC100245... 59 3e-07 ref|XP_002327656.1| predicted protein [Populus trichocarpa] gi|2... 58 9e-07 ref|XP_004134851.1| PREDICTED: uncharacterized protein LOC101220... 57 2e-06 emb|CAN62559.1| hypothetical protein VITISV_009207 [Vitis vinifera] 57 2e-06 ref|XP_002303409.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 >ref|XP_002265051.2| PREDICTED: uncharacterized protein LOC100245548 [Vitis vinifera] Length = 1169 Score = 59.3 bits (142), Expect = 3e-07 Identities = 34/81 (41%), Positives = 39/81 (48%), Gaps = 1/81 (1%) Frame = +3 Query: 3 SSWDFWDPFAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-CSKDTTSELA 179 SSWDFWDPF P+ SKDT+SELA Sbjct: 658 SSWDFWDPFVPSSSRSVTEEEWEATTMASEAPATTAVSASVTAPPSVVSGFSKDTSSELA 717 Query: 180 MVVSRNTKDLVEIITEVDEYF 242 MVVSRN+KDL EI+ EVD+YF Sbjct: 718 MVVSRNSKDLAEIVKEVDDYF 738 >ref|XP_002327656.1| predicted protein [Populus trichocarpa] gi|222836741|gb|EEE75134.1| predicted protein [Populus trichocarpa] Length = 632 Score = 57.8 bits (138), Expect = 9e-07 Identities = 33/80 (41%), Positives = 36/80 (45%) Frame = +3 Query: 3 SSWDFWDPFAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSKDTTSELAM 182 S WDFWDPF P E + + SELAM Sbjct: 119 SGWDFWDPFVPPPPISVEGEEWEEVTTTITTSEMVAVAPPSVASRFPKENASGSGSELAM 178 Query: 183 VVSRNTKDLVEIITEVDEYF 242 VVSRN+KDLVEII EVDEYF Sbjct: 179 VVSRNSKDLVEIIKEVDEYF 198 >ref|XP_004134851.1| PREDICTED: uncharacterized protein LOC101220098 [Cucumis sativus] gi|449491310|ref|XP_004158857.1| PREDICTED: uncharacterized LOC101220098 [Cucumis sativus] Length = 618 Score = 57.0 bits (136), Expect = 2e-06 Identities = 36/82 (43%), Positives = 40/82 (48%), Gaps = 2/82 (2%) Frame = +3 Query: 3 SSWDFWDPFAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-CSKDTTS-EL 176 S+WDFWDPF P+ SKDT+S EL Sbjct: 121 STWDFWDPFVPSTSRTVTEEEWEATTIASEAMVTVTGAASSAPPPSVVSGFSKDTSSTEL 180 Query: 177 AMVVSRNTKDLVEIITEVDEYF 242 AMVVSRNTKDLVEII E+DEYF Sbjct: 181 AMVVSRNTKDLVEIIKELDEYF 202 >emb|CAN62559.1| hypothetical protein VITISV_009207 [Vitis vinifera] Length = 627 Score = 57.0 bits (136), Expect = 2e-06 Identities = 33/81 (40%), Positives = 38/81 (46%), Gaps = 1/81 (1%) Frame = +3 Query: 3 SSWDFWDPFAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-CSKDTTSELA 179 SSWDFWDPF P+ SKDT+S LA Sbjct: 116 SSWDFWDPFVPSSSRSVTEEEWEATTMASEAPATTAVSASVTAPPSVVSGFSKDTSSXLA 175 Query: 180 MVVSRNTKDLVEIITEVDEYF 242 MVVSRN+KDL EI+ EVD+YF Sbjct: 176 MVVSRNSKDLAEIVKEVDDYF 196 >ref|XP_002303409.1| predicted protein [Populus trichocarpa] gi|222840841|gb|EEE78388.1| predicted protein [Populus trichocarpa] Length = 654 Score = 55.1 bits (131), Expect = 6e-06 Identities = 34/82 (41%), Positives = 37/82 (45%), Gaps = 2/82 (2%) Frame = +3 Query: 3 SSWDFWDPFAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ECSKDTTSEL 176 SSWDFWDPF P E + + SEL Sbjct: 127 SSWDFWDPFVPPPPRSMEEEEEEWEEVTTTTTASEMVAVVPPSVVSGFSKETASGSGSEL 186 Query: 177 AMVVSRNTKDLVEIITEVDEYF 242 AMVVSRN+KDLVEII EVDEYF Sbjct: 187 AMVVSRNSKDLVEIIKEVDEYF 208