BLASTX nr result

ID: Coptis21_contig00037120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037120
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20041.3| unnamed protein product [Vitis vinifera]              198   4e-49
ref|XP_002271199.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe...   198   4e-49
emb|CAN78018.1| hypothetical protein VITISV_002923 [Vitis vinifera]   198   4e-49
ref|XP_002534543.1| DNA binding protein, putative [Ricinus commu...   197   1e-48
ref|XP_002298196.1| predicted protein [Populus trichocarpa] gi|1...   196   1e-48

>emb|CBI20041.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  198 bits (503), Expect = 4e-49
 Identities = 95/106 (89%), Positives = 100/106 (94%)
 Frame = +3

Query: 3   FGREVGAGDRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSIL 182
           FGREVGA DRKLLPTY+LKSR YLGPTAMDAEMAFLMANQAL T GKLVYDPFVGTGSIL
Sbjct: 173 FGREVGAADRKLLPTYQLKSRTYLGPTAMDAEMAFLMANQALATAGKLVYDPFVGTGSIL 232

Query: 183 VGAAHYGAMTMGADIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLL 320
           V AAH+GAMTMGADIDIRVVRDGRGP+CNVWSNF+QY LPMP+SLL
Sbjct: 233 VAAAHFGAMTMGADIDIRVVRDGRGPDCNVWSNFKQYHLPMPISLL 278


>ref|XP_002271199.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM11 homolog
           [Vitis vinifera]
          Length = 477

 Score =  198 bits (503), Expect = 4e-49
 Identities = 95/106 (89%), Positives = 100/106 (94%)
 Frame = +3

Query: 3   FGREVGAGDRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSIL 182
           FGREVGA DRKLLPTY+LKSR YLGPTAMDAEMAFLMANQAL T GKLVYDPFVGTGSIL
Sbjct: 173 FGREVGAADRKLLPTYQLKSRTYLGPTAMDAEMAFLMANQALATAGKLVYDPFVGTGSIL 232

Query: 183 VGAAHYGAMTMGADIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLL 320
           V AAH+GAMTMGADIDIRVVRDGRGP+CNVWSNF+QY LPMP+SLL
Sbjct: 233 VAAAHFGAMTMGADIDIRVVRDGRGPDCNVWSNFKQYHLPMPISLL 278


>emb|CAN78018.1| hypothetical protein VITISV_002923 [Vitis vinifera]
          Length = 477

 Score =  198 bits (503), Expect = 4e-49
 Identities = 95/106 (89%), Positives = 100/106 (94%)
 Frame = +3

Query: 3   FGREVGAGDRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSIL 182
           FGREVGA DRKLLPTY+LKSR YLGPTAMDAEMAFLMANQAL T GKLVYDPFVGTGSIL
Sbjct: 173 FGREVGAADRKLLPTYQLKSRTYLGPTAMDAEMAFLMANQALATAGKLVYDPFVGTGSIL 232

Query: 183 VGAAHYGAMTMGADIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLL 320
           V AAH+GAMTMGADIDIRVVRDGRGP+CNVWSNF+QY LPMP+SLL
Sbjct: 233 VAAAHFGAMTMGADIDIRVVRDGRGPDCNVWSNFKQYHLPMPISLL 278


>ref|XP_002534543.1| DNA binding protein, putative [Ricinus communis]
           gi|223525076|gb|EEF27839.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 405

 Score =  197 bits (500), Expect = 1e-48
 Identities = 91/106 (85%), Positives = 99/106 (93%)
 Frame = +3

Query: 3   FGREVGAGDRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSIL 182
           FGREVG  DRKL+PTY+LKSR YLGPTAMDAEMAFLMANQALVTPGKLVYDPF GTGSIL
Sbjct: 171 FGREVGGADRKLIPTYQLKSRNYLGPTAMDAEMAFLMANQALVTPGKLVYDPFTGTGSIL 230

Query: 183 VGAAHYGAMTMGADIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLL 320
           + AAH+G+MTMGADIDIRVVRDGRGP+CNVWSNF+QYGLP P+ LL
Sbjct: 231 IAAAHFGSMTMGADIDIRVVRDGRGPDCNVWSNFKQYGLPSPIGLL 276


>ref|XP_002298196.1| predicted protein [Populus trichocarpa] gi|118486632|gb|ABK95153.1|
           unknown [Populus trichocarpa]
           gi|222845454|gb|EEE83001.1| predicted protein [Populus
           trichocarpa]
          Length = 474

 Score =  196 bits (499), Expect = 1e-48
 Identities = 93/106 (87%), Positives = 100/106 (94%)
 Frame = +3

Query: 3   FGREVGAGDRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSIL 182
           FGR VG  DRKLLPTY+LKSR+YLGPTAMDAEMAFLMANQALV PGKLVYDPFVGTGSIL
Sbjct: 170 FGRLVGGADRKLLPTYQLKSRRYLGPTAMDAEMAFLMANQALVMPGKLVYDPFVGTGSIL 229

Query: 183 VGAAHYGAMTMGADIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLL 320
           V AAH+GAMTMGADIDIR VRDGRGP+CNVWSNF+QYGLP+PV+LL
Sbjct: 230 VAAAHFGAMTMGADIDIRAVRDGRGPDCNVWSNFKQYGLPLPVALL 275